Bibliografija osebe. Seznam zajema vsa gradiva in ne le tista, kje je oseba mentor.

Doktorska dela (2)

1. Anja Mavrič: Vpliv seva Lactobacillus gasseri K7 in njegovih bakteriocinov na črevesno barierno funkcijo in vnetni odziv in vitro
2. Manca Pirc: Raziskave bakterij, povzročiteljic ožiga, na rastlinah iz družine Rosaceae

Magistrska dela (1)

1. Tina Demšar: Vpliv rizosfernih bakterij na rast sadik paradižnika (Solanum lycopersicum L.)

Diplomska dela (4)

1. Mojca Vek: Optimizacija metod odkrivanja in shranjevanja termotolerantnih bakterij rodu Campylobacter v rutinskem laboratoriju
2. Valerija Zidarič: Osamitev, karakterizacija in pogostnost bakterije Clostridium difficile pri živalih
3. Sandra Janežič: Molekularne metode za tipizacijo črevesnih patogenih bakterij Clostridium difficile
4. Tomaž Rijavec: Bakterijski endofiti v zrnu koruze in njihov vpliv na izvorne rastline

Druga dela (13)

1. Immune response and host microbiota in disease development
2. Tomaž Rijavec: Bakterijski endofiti v zrnu koruze in njihov vpliv na izvorne rastline
3. Mateja Rakuša, Maja Rupnik, Melania Scarpa, Gregor Anderluh, Giorgio Palù, Ignazio Castagliuolo: Repetitive domain of Clostridium difficile toxin B exhibits cytotoxic effects on human intestinal epithelial cells and decreases epithelial barrier function
4. Vita Rozman, Petra Mohar Lorbeg, Primož Treven, Tomaž Accetto, Sandra Janežič, Maja Rupnik, Bojana Bogovič Matijašić: Genomic insights into antibiotic resistance and mobilome of lactic acid bacteria and bifidobacteria
5. Vita Rozman, Petra Mohar Lorbeg, Nina Chanishvili, Tomaž Accetto, Elene Kakabadze, Nino Grdzelishvili, Maja Rupnik, Bojana Bogovič Matijašić: Genomic insights into the safety and bacteriocinogenic potential of isolates from artisanal fermented milk Matsoni
6. Stina Hedžet, Maja Rupnik, Tomaž Accetto: Novel Siphoviridae bacteriophages infecting Bacteroides uniformis contain diversity generating retroelement
7. Matej Butala, Maja Rupnik, Beata Walter, Stephen Cartman, Nigel Peter Minton: The SOS response master regulator LexA is associated with sporulation, motility and biofilm formation in Clostridium difficile
8. Anna Dragoš, Polonca Štefanič, Ines Mandić-Mulec, Maja Rupnik, Sara Beigot Glaser, Sabina Vatovec: Exploring ComQXPA quorum-sensing diversity and biocontrol potential of Bacillus spp. isolates from tomato rhizoplane
9. Aleš Lapanje, Alexis Zrimec, Damjana Drobne, Maja Rupnik: Long-term Hg pollution-induced structural shifts of bacterial community in theterrestrial isopod (Porcellio scaber) gut
10. Aleš Lapanje, Damjana Drobne, Nataša Nolde, Janez Valant, Barbara Hubad, Vladka Lešer, Maja Rupnik: Long-term HG pollution induced Hg tolerance in the terrestrial isopod Porcellio scaber (Isopoda, Crustacea)
11. Primož Treven, Aleksander Mahnič, Maja Rupnik, Majda Golob, Tina Pirš, Bojana Bogovič Matijašić, Petra Mohar Lorbeg: Evaluation of human milk microbiota by 16S rRNA gene next-generation sequencing (NGS) and cultivation/MALDI-TOF mass spectrometry identification
12. Stina Hedžet, Maja Rupnik, Tomaž Accetto: Broad host range may be a key to long-term persistence of bacteriophages infecting intestinal Bacteroidaceae species
13. Tomaž Bratkovič, Abida Zahirović, Maruša Bizjak, Maja Rupnik, Borut Štrukelj, Aleš Berlec: New treatment approaches for Clostridioides difficile infections