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Delna karakterizacija metabolita bakterije Clostridium sporogenes s sposobnostjo inaktivacije toksinov bakterije Clostridioides difficile
ID Kristovič, Nika (Avtor), ID Rupnik, Maja (Mentor) Več o mentorju... Povezava se odpre v novem oknu, ID Mahnič, Aleksander (Komentor)

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Izvleček
Opazovali smo aktivnost supernatanta bakterije Clostridium sporogenes, ki inaktivira toksina TcdA in TcdB bakterije Clostridioides difficile, z namenom ovrednotenja lastnosti efektorske snovi in osnovnih fizikalno-kemijskih lastnosti. Zaviralno aktivnost smo ovrednotili z merjenjem relativne koncentracije toksinov z metodo ELISA. Supernatant bakterije C. sporogenes smo obdelali s toplotno denaturacijo (99 °C, 1 h), spremembo pH, dodatkom EDTA ter masno filtracijo z mejami 30 kDa in 3 kDa. Toplotna obdelava supernatanta je povzročila popolno izgubo zaviralnega učinka, medtem ko je netretiran supernatant povzročil statistično značilno znižanje relativne koncentracije TcdA/TcdB v dveh neodvisnih eksperimentih (p = 0,014 in p = 0,047), kar kaže na toplotno labilnost efektorske snovi. Membranska separacija je pokazala, da zaviralna aktivnost ostane ohranjena tudi po odstranitvi molekul z maso večjo od 30 kDa in 3 kDa (v obeh primerih p = 0,0035), medtem ko filtracija kontrolnega medija WCAB ni imela značilnega vpliva na izmerjeni signal (p = 0,14). Na podlagi teh rezultatov sklepamo, da je efektorska snov zelo majhna molekula z molekulsko maso manjšo od 3 kDa, najverjetneje peptidne narave. Poskusi z dodatkom EDTA in spremembo pH niso omogočili zanesljivih zaključkov o vključenosti kovinskih ionov ali pH-optimumu aktivnosti zaradi izrazite interference z ELISA-metodo.

Jezik:Slovenski jezik
Ključne besede:Clostridium sporogenes, Clostridioides difficile, ELISA, supernatant, toksin
Vrsta gradiva:Magistrsko delo/naloga
Tipologija:2.09 - Magistrsko delo
Organizacija:BF - Biotehniška fakulteta
Založnik:[N. Kristovič]
Leto izida:2026
PID:20.500.12556/RUL-187875 Povezava se odpre v novem oknu
UDK:579.2
COBISS.SI-ID:291238147 Povezava se odpre v novem oknu
Datum objave v RUL:16.09.2026
Število ogledov:37
Število prenosov:9
Metapodatki:XML DC-XML DC-RDF
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Sekundarni jezik

Jezik:Angleški jezik
Naslov:Partial characterization of Clostriduim sporogenes metabolite with the ability to inactivate Clostridioides difficile toxins
Izvleček:
We investigated the activity of the supernatant of Clostridium sporogenes, which inactivates the toxins TcdA and TcdB of Clostridioides difficile, with the aim of partially characterizing the effector molecule and its basic physiochemical properties. The inhibitory activity was assessed by measuring the relative concentration of toxins using an ELISA-based method following the application of different experimental approaches, including thermal denaturation (99°C, 1 h), pH modification, EDTA addition, and molecular weight–based filtration with cut-off values of 30 kDa and 3 kDa. Thermal treatment of the supernatant resulted in a complete loss of inhibitory activity, whereas the untreated supernatant caused a statistically significant reduction in the relative concentration of TcdA/TcdB in two independent experiments (p = 0.014 and p = 0.047), indicating that the effector substance is thermolabile. Membrane separation further demonstrated that the inhibitory effect was retained after the removal of molecules larger than 30 kDa and 3 kDa (p = 0.0035 in both cases), while filtration of the control medium (WCAB) had no significant effect on the measured signal (p = 0.14). Taken together, these results suggest that the effector substance is a very small molecule with a molecular weight below 3 kDa, most likely of a peptidic nature. Experiments involving EDTA addition and pH changes did not allow reliable conclusions regarding metal dependence or pH optimum of activity, as pronounced interference with the ELISA method was observed in both cases.

Ključne besede:Clostridium sporogenes, Clostridioides difficile, ELISA, supernatant, toxin

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