Complete and nearly complete nucleotide sequences of barley yellow dwarf virus-PAS in wheat in Türkiye

İlbaği, Havva (avtor), Masonbrink, Rick (avtor), Miller, W. Allen (avtor)

• Jezik: Angleški jezik
• Ključne besede: BYDV-PAS, wheat, high-throughput sequencing
• Vrsta gradiva: Članek v reviji
• Tipologija: 1.01 - Izvirni znanstveni članek
• Organizacija: BF - Biotehniška fakulteta
• Status publikacije: Objavljeno
• Različica publikacije: Objavljena publikacija
• Leto izida: 2026
• Št. strani: 8 str.
• Številčenje: Vol. 122, no. 2
• PID: 20.500.12556/RUL-184426
• UDK: 63
• ISSN pri članku: 1854-1941
• DOI: 10.14720/aas.2026.122.2.25943
• COBISS.SI-ID: 283854339
• Datum objave v RUL: 07.07.2026

Gradivo je del revije

• Naslov: Acta agriculturae Slovenica
• Založnik: Biotehniška fakulteta, Oddelek za agronomijo in Oddelek za zootehniko, Biotehniška fakulteta, Oddelek za agronomijo in Oddelek za zootehniko, Univerza v Ljubljani, Biotehniška fakulteta, Založba Univerze v Ljubljani
• ISSN: 1854-1941
• COBISS.SI-ID: 219581184

Licence

• Licenca: CC BY 4.0, Creative Commons Priznanje avtorstva 4.0 Mednarodna
• Povezava: http://creativecommons.org/licenses/by/4.0/deed.sl
• Opis: To je standardna licenca Creative Commons, ki daje uporabnikom največ možnosti za nadaljnjo uporabo dela, pri čemer morajo navesti avtorja.

Sekundarni jezik

• Jezik: Slovenski jezik
• Naslov: Popolna in skoraj popolna nukleotidna zaporedja pritlikavega virusa ječmenove rumenice (PAS) na pšenici v Turčiji

Izvleček

Barley yellow dwarf virus (BYDV) causes important yield losses in cereal crops globally. BYDV-PAS, a member of the genus Luteovirus within the family Tombusviridae, was recently distinguished from BYDV-PAV (type isolate PAV-129). This study represents the complete and nearly complete genome sequences of BYDV-PAS from wheat samples collected in Türkiye, using high-throughput sequencing. The complete genome sequence of the BYDV-PAS WO2-47-1 isolate and the nearly complete genome sequence of the TR60-S51 isolate are 5673 nt and 5629 nt in length, respectively. Sequence comparisons revealed that WO2-47-1 and TR60-S51 PAS isolates share the nucleotide identity range from 79.44 % to 98.68 % and 79.52 % to 98.74 % with isolates from Estonia, Ireland, and South Korea, respectively, and the amino acid identity range from 79.39 % to 97.75 % and 79.34 % to 96.52 % with isolates from Estonia, Ireland, and South Korea, respectively. Phylogenetic analysis indicated that WO2-47-1 and TR60-S51 wheat isolates clustered with European BYDV-PAS isolates, while remaining distinct from Korean, Australian, Canadian, and USA isolates. Further surveys conducted between 2022 and 2024 in Tekirdağ province revealed that 6 out of 50 wheat samples (12%) were infected with BYDV-PAS.

• Ključne besede: BYDV-PAS, pšenica, visoko zmogljivo sekvenciranje