Goals: Spitz proliferations are a subset of melanocytic tumours, genetically defined by kinase-receptor fusions or HRAS mutations/amplifications, that span the spectrum from benign naevi to melanomas. They are often misdiagnosed as conventional melanoma due to their morphologic resemblance. Classification into biologic subgroups is often unreliable due to numerous and poorly defined criteria. Based on an analysis of a large cohort of Spitz proliferations, our goal was to identify the histomorphologic, immunohistochemical, and molecular parameters that are most significant for the proper classification of these lesions. Additional goals were to develop custom-made panels for DNA and RNA sequencing, and to identify potential novel biomarkers based on results from whole-transcriptome sequencing (WTS).
Methods: Our study included 276 Spitz proliferations. The same immunohistochemical panel was performed for all cases. A morphologic diagnosis was rendered for all cases using three distinct morphologic criteria: severe cytologic atypia, ≥ 2 mitotic figures/mm2, and a diffuse growth pattern. In a subset of cases, additional molecular analyses were performed: BRAF/NRAS/HRAS hotspot mutations, targeted DNA/RNA sequencing, and/or WTS. In the subset with targeted DNA sequencing, a final (integrated) diagnosis was also made based on two criteria: (1) a morphologic diagnosis of high-grade atypical Spitz tumour, and (2) the presence of molecular markers of malignancy (pTERT mutation and/or ≥ 4 copy-number variations [CNVs]).
Results: Morphologically, we classified 164 Spitz naevi, 78 low-grade atypical Spitz tumours, and 34 high-grade atypical Spitz tumours. Considering molecular findings, 9 of 49 cases met criteria for Spitz melanoma. All tumours followed an indolent clinical course during the follow-up period (median, 74 months; range, 6-172 months). The most significant parameters for classifying Spitz proliferations were age, Breslow thickness, deep dermal mitoses, prominent pagetoid spread, Ki-67 proliferation index of ≥ 10 %, loss of p16 expression, diffuse PRAME positivity, and numerous CNVs. WTS revealed several candidate biomarkers differentially expressed across Spitz subgroups.
Conclusions: Integrating morphologic and molecular-genetic data enabled reliable identification of the most atypical Spitz proliferations. We confirmed that Spitz melanomas account for only about 3% of all Spitz proliferations and have an indolent clinical course. Molecular-genetic analyses substantially reduced the proportion of tumours with uncertain malignant potential and demonstrated that identifying driver and secondary genetic alterations is essential for appropriate clinical management. Our findings support adopting an integrated morphologic-molecular approach in routine diagnostics, especially in morphologically atypical cases.
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