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Viral metagenomic data analyses of five new world bat species from Argentina : identification of 35 novel DNA viruses
ID
Bolatti, Elisa M.
(
Avtor
),
ID
Zorec, Tomaž Mark
(
Avtor
),
ID
Hošnjak, Lea
(
Avtor
),
ID
Poljak, Mario
(
Avtor
),
ID
Giri, Adriana A.
(
Avtor
), et al.
PDF - Predstavitvena datoteka,
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(5,17 MB)
MD5: C00AA1956034F4DBC52A7332FA40D696
URL - Izvorni URL, za dostop obiščite
https://www.mdpi.com/2076-2607/10/2/266
Galerija slik
Izvleček
Bats are natural reservoirs of a variety of zoonotic viruses, many of which cause severe human diseases. Characterizing viruses of bats inhabiting different geographical regions is important for understanding their viral diversity and for detecting viral spillovers between animal species. Herein, the diversity of DNA viruses of five arthropodophagous bat species from Argentina was investigated using metagenomics. Fecal samples of 29 individuals from five species (Tadarida brasiliensis, Molossus molossus, Eumops bonariensis, Eumops patagonicus, and Eptesicus diminutus) living at two different geographical locations, were investigated. Enriched viral DNA was sequenced using Illumina MiSeq, and the reads were trimmed and filtered using several bioinformatic approaches. The resulting nucleotide sequences were subjected to viral taxonomic classification. In total, 4,520,370 read pairs were sequestered by sequencing, and 21.1% of them mapped to viral taxa. Circoviridae and Genomoviridae were the most prevalent among vertebrate viral families in all bat species included in this study. Samples from the T. brasiliensis colony exhibited lower viral diversity than samples from other species of New World bats. We characterized 35 complete genome sequences of novel viruses. These findings provide new insights into the global diversity of bat viruses in poorly studied species, contributing to prevention of emerging zoonotic diseases and to conservation policies for endangered species.
Jezik:
Angleški jezik
Ključne besede:
new bat species
,
metagenomics
,
virus identification
,
Chiroptera
,
virome
,
Cressdnaviricota
,
Cossaviricota
,
Anelloviridae
Vrsta gradiva:
Članek v reviji
Tipologija:
1.01 - Izvirni znanstveni članek
Organizacija:
MF - Medicinska fakulteta
Status publikacije:
Objavljeno
Različica publikacije:
Objavljena publikacija
Leto izida:
2022
Št. strani:
26 str.
Številčenje:
Vol. 10, iss. 2, art. 266
PID:
20.500.12556/RUL-137038
UDK:
616.9
ISSN pri članku:
2076-2607
DOI:
10.3390/microorganisms10020266
COBISS.SI-ID:
94811651
Datum objave v RUL:
31.05.2022
Število ogledov:
724
Število prenosov:
85
Metapodatki:
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Objavi na:
Gradivo je del revije
Naslov:
Microorganisms
Skrajšan naslov:
Microorganisms
Založnik:
MDPI AG
ISSN:
2076-2607
COBISS.SI-ID:
523277081
Licence
Licenca:
CC BY 4.0, Creative Commons Priznanje avtorstva 4.0 Mednarodna
Povezava:
http://creativecommons.org/licenses/by/4.0/deed.sl
Opis:
To je standardna licenca Creative Commons, ki daje uporabnikom največ možnosti za nadaljnjo uporabo dela, pri čemer morajo navesti avtorja.
Začetek licenciranja:
01.02.2022
Sekundarni jezik
Jezik:
Slovenski jezik
Ključne besede:
nove vrste netopirjev
,
metagenomika
,
identifikacija virusa
Projekti
Financer:
Drugi - Drug financer ali več financerjev
Program financ.:
Agencia Nacional de Promoción Científica y Tecnológica
Številka projekta:
PICT-2019-01790
Financer:
Drugi - Drug financer ali več financerjev
Program financ.:
European Society of Clinical Microbiology and Infectious Diseases, Observership Program
Financer:
ARRS - Agencija za raziskovalno dejavnost Republike Slovenije
Številka projekta:
P3-0083
Naslov:
Odnosi parazitskega obstajanja
Financer:
Drugi - Drug financer ali več financerjev
Program financ.:
CONICET, Postdoctoral fellowships
Financer:
Drugi - Drug financer ali več financerjev
Program financ.:
CONICET, Doctoral fellowships
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