11. Analysis of the global population structure of Paenibacillus larvae and outbreak investigation of American foulbrood using a stable wgMLST schemeBojan Papić, Margo Diricks, Darja Kušar, 2021, izvirni znanstveni članek Ključne besede: Paenibacillus larvae, American foulbrood, whole-genome sequencing, whole-genome multilocus sequence typing, core-genome multilocus sequence typing, whole-genome single nucleotide polymorphism, genotype, molecular sequence Celotno besedilo (datoteka, 2,30 MB) Gradivo ima več datotek! Več... |
12. Using whole-genome sequencing to assess the diversity of Paenibacillus larvae within an outbreak and a beekeeping operationBojan Papić, Majda Golob, Irena Zdovc, Jana Avberšek, Metka Pislak, Darja Kušar, 2021, izvirni znanstveni članek Ključne besede: Paenibacillus larvae, American foulbrood, AFB, whole-genome sequencing, WGS, whole-genome multilocus sequence typing, wgMLST, outbreak, beekeeping operation, molecular sequence data, genotype Celotno besedilo (datoteka, 1,11 MB) Gradivo ima več datotek! Več... |
13. Antimicrobial resistance and virulence genes in Enterococcus faecium and Enterococcus faecalis from humans and retail red meatMajda Golob, Mateja Pate, Darja Kušar, Urška Dermota, Jana Avberšek, Bojan Papić, Irena Zdovc, 2019, izvirni znanstveni članek Ključne besede: Anti-bacterial agents - pharmacology, drug resistance bacterial - genetics, Enterococcus faecalis - genetics - drug effects - growth & development, Enterococcus faecium - genetics - drug effects - growth & development, virulence factors - genetics, meat - microbiology, vancomycin resistance - genetics, models animal, veterinary drugs Celotno besedilo (povezava drugam) |
14. Source tracking on a dairy farm reveals a high occurrence of subclinical mastitis due to hypervirulent Listeria monocytogenes clonal complexesBojan Papić, Majda Golob, Darja Kušar, Mateja Pate, Irena Zdovc, 2019, izvirni znanstveni članek Ključne besede: Listeria monocytogenes, food safety, whole‐genome sequencing, pulsed‐field gel electrophoresis, virulence, cattle Celotno besedilo (datoteka, 160,93 KB) Gradivo ima več datotek! Več... |
15. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, izvirni znanstveni članek Ključne besede: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats Celotno besedilo (datoteka, 537,70 KB) Gradivo ima več datotek! Več... |
16. Genetic diversity of Listeria monocytogenes strains in ruminant abortion and rhombencephalitis cases in comparison with the natural environmentBojan Papić, Mateja Pate, Benjamin Félix, Darja Kušar, 2019, izvirni znanstveni članek Ključne besede: Microbiology - veterinary, Listeria monocytogenes - genetics, listeriosis, PFGE, MLST, population structure, cattle Celotno besedilo (povezava drugam) |
17. Biotehnološki potencial metagenomskih knjižnic iz mikrobnih skupnosti kraških jamBojan Papić, 2015, magistrsko delo Ključne besede: mikrobna ekologija, mikrobne združbe, jamska mikrobiologija, metagenomika, metagenomske knjižnice, bioinformatika, biotehnološki potencial, bioaktivne snovi Celotno besedilo (datoteka, 3,70 MB) |
18. Antimicrobial resistance and molecular characterization of methicillin-resistant Staphylococcus aureus from two pig farmsMajda Golob, Mateja Pate, Darja Kušar, Urška Zajc, Bojan Papić, Matjaž Ocepek, Irena Zdovc, Jana Avberšek, 2022, izvirni znanstveni članek Ključne besede: livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA), pigs, multidrug resistance (MDR), spa typing, longitudinal study Celotno besedilo (datoteka, 1,24 MB) Gradivo ima več datotek! Več... |
19. Helicobacter colisuis sp. nov., isolated from caecal contents of domestic pigs (Sus scrofa domesticus)Igor Gruntar, Rok Kostanjšek, Tina Pirš, Bojan Papić, 2022, izvirni znanstveni članek Ključne besede: Helicobacter, polymerase chain reaction, Sus scrofa, caecum, domestic pig, Sus scrofa domesticus, novel species Celotno besedilo (datoteka, 4,46 MB) Gradivo ima več datotek! Več... |
20. Phylogeography of Brucella suis biovar 2 with focus on Slovenian wildlifeBojan Papić, Darja Kušar, Branko Krt, Matjaž Ocepek, Jana Avberšek, 2023, izvirni znanstveni članek Ključne besede: Brucella suis, biovar 2, wildlife, whole-genome sequencing Celotno besedilo (datoteka, 1,33 MB) Gradivo ima več datotek! Več... |