Chemical and functional changes in cell membranes can often be the cause of the development of various diseases. With the continuous development of fluorescence microscopy, especially STED microscopy, we are now able to gain insight into the relationship between the behavior of cells and the changes in their membrane and environment. To observe these changes with the fluorescence microscope, we need to synthesize fluorescent probes with suitable properties. It is important that these probes respond to changes in cellular properties and can be easily incorporated into cell membranes.
In this master's thesis, we attempted to synthesize fluorescent probes suitable for observing cell membranes with the STED microscope. Originally, we planned to synthesize two types of dyes; however, our main focus was to prepare derivatives with a styryl base. We planned to modify the properties of the probes by introducing different functional groups into the styryl base structure. The synthesis presented problems at the initial stage, but we tried to overcome them by changing the reaction conditions and reagents.
The synthesis of only two probes was successful: 11 and 13E. To test the practicality of these probes, we analyzed them at the Jožef Stefan Institute. We performed measurements using both STED and a confocal microscope and observed the response of the emission spectrum of these probes in different solvents. Due to their amphiphilic properties, both probes were incorporated into the cell membrane, however probe 11 immediately induced cell apoptosis. Signs of apoptosis were also detected in the measurements with compound 13E, but much later than with compound 11. At the IJS, we found that both probes, with the exception of cytotoxicity, had suitable properties for recording spectra with a STED microscope.
We also synthesized a compound with an oxazole attached to the quinoline ring. With further reactions, we wanted to attach different functional groups to the oxazole, but the reactions did not proceed. We could not figure out the reason for the failed synthesis, so we were forced to forgo further progress in the originally planned reaction scheme.
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