A set of SNPs enabling identification of trouts and their hybrids in Salmo genus

Pustovrh, Gašper (author), Snoj, Aleš (author), Sušnik Bajec, Simona (author)

We present a set of nuclear DNA SNPs enabling discrimination between Salmo marmoratus, S. obtusirostris and different evolutionary lineages of S. trutta. The loci containing SNPs were either isolated from marble trout nuclear DNA or inferred from literature. By comparing the joint sequences (ca. 5,830 bp) among 48 tested individuals, 127 substitutions and 8 indels were found. Forty-one of them, distributed across 16 loci, turned out as species orlineages specific. This set of SNP markers may be applied as molecular tool for genetic management purposes as well as in revolving phylogenetic and taxonomic uncertainties of different trout stocks.

• Language: English
• Keywords: ribe, Salmonidae, postrvi, molekularna genetika, nuklearna DNK, molekularni markerji
• Work type: Not categorized
• Typology: 1.01 - Original Scientific Article
• Organization: BF - Biotechnical Faculty
• Year: 2011
• Number of pages: Str. 147-150
• Numbering: Vol. 3, no. 1
• PID: 20.500.12556/RUL-36529
• UDC: 597.2/.5:575
• DOI: 10.1007/s12686-010-9310-6
• COBISS.SI-ID: 2741640
• Publication date in RUL: 10.07.2015

PUSTOVRH, Gašper, SNOJ, Aleš and SUŠNIK BAJEC, Simona, 2011, A set of SNPs enabling identification of trouts and their hybrids in Salmo genus. [online]. 2011. Vol. 3, no. 1, p. 147–150. [Accessed 29 June 2025]. DOI 10.1007/s12686-010-9310-6. Retrieved from: http://www.springerlink.com/content/p17l54w86n336746/fulltext.pdf