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Primerjava metod za izolacijo bakteriofagov iz različnih naravnih okolij
ID Štirn, Franc (Author), ID Podgornik, Aleš (Mentor) More about this mentor... This link opens in a new window

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Abstract
Procesi za izolacijo bakteriofagov iz okoljskih vzorcev so ključen predmet raziskav za učinkovito iskanje bakteriofagov v okolju in predstavljajo glavni način identifikacije novih bakteriofagov, ki so zmožni inficirati na antibiotike odporne patogene bakterije. Ti so za medicino zelo relevantni kot alternativa uporabi antibiotikov, ki so za boj proti okužbam nekaterih bakterijskih vrst neučinkoviti, zaradi njihove vsesplošne razširjenosti, pa jih je moč najti skoraj kjerkoli v okolju. Za izolacijo iz okoljskih vzorcev so bile razvite številne metode, štiri so bile preizkušene in primerjane v sklopu te naloge. Izmed preizkušenih postopkov je najvišji izkoristek fagov v osnovnem vzorcu dosegla anionska izmenjevalna kromatografija, a z najvišjimi finančnimi stroški materiala in opreme ter najvišjo zahtevnostjo izvedbe. Šaržna kromatografija s hidroksiapatitom predstavlja cenovno bolj ugodno in enostavnejšo alternativo s primerljivim izkoristkom, a z višjo standardno napako, medtem ko precipitacija s polietilen glikolom predstavlja še cenejšo in do fagnih delcev bolj nežno metodo, ki pa trpi za slabimi izkoristki. Metoda z obogatitvijo fagne suspenzije ni bila uspešno izvedena z izbranim postopkom, zaradi česar se te metode ni dalo primerjati z ostalimi. Optimalna izbira metode za izolacijo bakteriofagov iz okoljskih vzorcev je po ugotovitvah v tem delu torej odvisna od potreb in vložka izvajalca.

Language:Slovenian
Keywords:bakteriofagi, fagi, fagna terapija, izolacija, okoljski vzorci, precipitacija, kromatografija
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Year:2026
PID:20.500.12556/RUL-190034 This link opens in a new window
COBISS.SI-ID:302219011 This link opens in a new window
Publication date in RUL:21.10.2026
Views:75
Downloads:20
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Secondary language

Language:English
Title:Testing different methods for isolating bacteriophages from different natural environments
Abstract:
The processes for bacteriophage isolation are a key subject of study for efficient phage hunting, which represents the main way of discovery of novel bacteriophages capable of infection antibiotic resistant pathogenic bacteria. These are highly medically relevant as an alternative to antibiotics, which are inefficient in combating certain infections, and are able to be found almost anywhere in the envirnment due to their ubiquity. Numerous methods for bacteriophage isolation have been developed, four of which have been tested and compared in the scope of this work. Of the tested procedures, anion exchange chromatography yielded the highest recovery, although with also the highest financial cost per processed sample and the highest level of complexity of execution. Batch chromatography using hydroxyapatite represents a cheaper and simpler alternative with comparable recovery but a significantly larger standard error, while precipitation with polyethylene gylcol remains an even cheaper alternative, which suffers from a significantly worse recovery. The phage suspension enrichment method was not performed successfully with the chosen procedure, hence it wasn't compared with the rest of the methods. The optimal choice of method for phage hunting, as indicated by the findings of this work, is therefore subject to the needs and resources of the phage hunter.

Keywords:Bakteriophages, phages, phage therapy, isolation, environmental samples, precipitation, chromatography

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