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Vzpostavitev inducibilnega celičnega modela utišanja gena DHCR24 iz sinteze holesterola v jetrnih celicah
ID Pajnič, Neja (Author), ID Skubic, Cene (Mentor) More about this mentor... This link opens in a new window

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Abstract
Encim DHCR24 (24-dehidroholesterol reduktaza) deluje v Blochovi sintezni poti holesterola in lahko reducira več različnih sterolnih intermediatov. Encim reducira dvojno vez, ki jo imajo vsi intermediati na mestu C24, s čimer nastanejo bolj nasičeni steroli, vključno s končnim produktom holesterolom. Motnje v delovanju DHCR24 povzročijo kopičenje sterolov, ki vpliva na celične procese. V okviru diplomske naloge smo želeli vzpostaviti inducibilen lentivirusni shRNA-sistem za specifično in časovno nadzorovano utišanje DHCR24 v jetrnih celičnih linijah ter s pomočjo LC-MS/MS kvantitativno določiti spremembe v sterolnem profilu. Konstrukt za shRNA proti DHCR24 smo z lentivirusnimi delci vnesli v tri različne jetrne celice (HepG2, Huh7 in Snu449). Po integraciji v genom se zapis za shRNA ohrani tudi po delitvi celic. Inducibilni shRNA-sistem (pod nadzorom IPTG‑inducibilnega promotorja) omogoča vklop ali izklop utišanja genov. To je pri DHCR24 ključno, saj njegova popolna odstranitev zavre rast in preživetje celic. Po ekstrakciji in kvantifikaciji sterolov z LC-MS/MS, smo dokazali utišanje DHCR24 v celični liniji Snu449 MOI5, ki ni bila tretirana z antibiotikom.

Language:Slovenian
Keywords:sinteza holesterola, DHCR24, shRNA, lentivirusi, celične linije
Work type:Bachelor thesis/paper
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2026
PID:20.500.12556/RUL-187179 This link opens in a new window
Publication date in RUL:09.09.2026
Views:57
Downloads:15
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Secondary language

Language:English
Title:Establishment of an Inducible Cellular Model of DHCR24 Gene Silencing in the Cholesterol Biosynthesis Pathway in Hepatic Cells
Abstract:
The enzyme DHCR24 (24-dehydrocholesterol reductase) functions in the Bloch pathway of cholesterol biosynthesis and is capable of reducing several sterol intermediates. It catalyzes the reduction of the double bond at the C24 position present in all intermediates, resulting in the formation of more saturated sterols, including cholesterol as the final product. Impaired DHCR24 activity leads to the accumulation of sterol intermediates, which can affect various cellular processes. The aim of this Undergraduate thesis was to establish an inducible lentiviral shRNA system for specific and temporally controlled silencing of DHCR24 in hepatic cell lines and to quantitatively determine changes in the sterol profile using LC-MS/MS. A shRNA construct targeting DHCR24 was introduced into three hepatic cell lines (HepG2, Huh7, and Snu449) using lentiviral particles. Following genomic integration, the shRNA cassette is stably maintained through subsequent cell divisions. The inducible shRNA system, regulated by an IPTG-inducible promoter, enables controlled activation or suppression of gene silencing. This is particularly important for DHCR24, as its complete loss impairs cell growth and survival. Following sterol extraction and quantification by LC-MS/MS, successful DHCR24 silencing was demonstrated in the Snu449 MOI5 cell line that had not been subjected to antibiotic selection.

Keywords:cholesterol biosynthesis, DHCR24, shRNA, lentiviruses, hepatic cell lines

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