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Multi-phase field model reveals internal dissipation is crucial for spontaneous hole formation in cell monolayers
ID Pinto, Diogo E. P. (Author), ID Rozman, Jan (Author), ID Yeomans, Julia M. (Author)

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Abstract
Although cell monolayers typically remain confluent, they can spontaneously develop persistent holes as a result of collective cellular motion. Recent studies on MDCK monolayers cultured on soft substrates have revealed that cells can align to create regions of local nematic order, and topological defects that generate localised mechanical stresses which can spontaneously trigger hole formation. To investigate this process, we develop a continuum multi-phase field model that incorporates internal dissipation and active dipolar forces that drive cell shape anisotropy. Our simulations show that reducing substrate friction enhances cell-cell velocity correlations. In the low-friction regime, topological defects generate spiral flow patterns that concentrate stress and can trigger hole formation. By contrast, in the high-friction regime, holes do not nucleate. We further demonstrate that the number and stability of the holes—whether they close or persist—depends on both substrate friction and cellular activity, through a non-dimensional friction number. These findings highlight the importance of internal dissipation in modelling collective cell motion and the critical role of collective dynamics in maintaining tissue integrity.

Language:English
Keywords:biological physics, condensed matter physics, statistical physics
Work type:Article
Typology:1.01 - Original Scientific Article
Organization:FMF - Faculty of Mathematics and Physics
Publication status:Published
Publication version:Version of Record
Year:2026
Number of pages:8 str.
Numbering:Vol. 17, art. no. 8288
PID:20.500.12556/RUL-185957 This link opens in a new window
UDC:577.3
ISSN on article:2041-1723
DOI:10.1038/s41467-026-74977-y This link opens in a new window
COBISS.SI-ID:288691459 This link opens in a new window
Publication date in RUL:24.08.2026
Views:67
Downloads:27
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Record is a part of a journal

Title:Nature communications
Shortened title:Nat. Commun.
Publisher:Nature Publishing Group
ISSN:2041-1723
COBISS.SI-ID:2315876 This link opens in a new window

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:biofizika, fizika kondenzirane snovi, statistična fizika

Projects

Funder:UKRI - UK Research and Innovation
Project number:EP/Z002761/1
Name:Rheology and Fracture in Confluent Cell Layers

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:J1-70062
Name:Nematska aktivnost s celično ločljivostjo v tridimenzionalnih tkivih: morfogeneza, kolektivno gibanje in aktivne mešanice

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:RSF-0106
Name:Razvojni steber financiranja

Funder:ARIS - Slovenian Research and Innovation Agency
Project number:P1-0055
Name:Biofizika polimerov, membran, gelov, koloidov in celic

Funder:UKRI - UK Research and Innovation
Project number:EP/W023849/1
Name:Early-stage embryo as an active self-tuning soft material

Funder:UKRI - UK Research and Innovation
Project number:EP/Y033981/1
Name:ActBio: Exploiting the Parallels between Active Matter and Mechanobiology

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