Complete and nearly complete nucleotide sequences of barley yellow dwarf virus-PAS in wheat in Türkiye

İlbaği, Havva (author), Masonbrink, Rick (author), Miller, W. Allen (author)

• Language: English
• Keywords: BYDV-PAS, wheat, high-throughput sequencing
• Work type: Article
• Typology: 1.01 - Original Scientific Article
• Organization: BF - Biotechnical Faculty
• Publication status: Published
• Publication version: Version of Record
• Year: 2026
• Number of pages: 8 str.
• Numbering: Vol. 122, no. 2
• PID: 20.500.12556/RUL-184426
• UDC: 63
• ISSN on article: 1854-1941
• DOI: 10.14720/aas.2026.122.2.25943
• COBISS.SI-ID: 283854339
• Publication date in RUL: 07.07.2026

Record is a part of a journal

• Title: Acta agriculturae Slovenica
• Publisher: Biotehniška fakulteta, Oddelek za agronomijo in Oddelek za zootehniko, Biotehniška fakulteta, Oddelek za agronomijo in Oddelek za zootehniko, Univerza v Ljubljani, Biotehniška fakulteta, Založba Univerze v Ljubljani
• ISSN: 1854-1941
• COBISS.SI-ID: 219581184

Licences

• License: CC BY 4.0, Creative Commons Attribution 4.0 International
• Link: http://creativecommons.org/licenses/by/4.0/
• Description: This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

• Language: Slovenian
• Title: Popolna in skoraj popolna nukleotidna zaporedja pritlikavega virusa ječmenove rumenice (PAS) na pšenici v Turčiji

Abstract

Barley yellow dwarf virus (BYDV) causes important yield losses in cereal crops globally. BYDV-PAS, a member of the genus Luteovirus within the family Tombusviridae, was recently distinguished from BYDV-PAV (type isolate PAV-129). This study represents the complete and nearly complete genome sequences of BYDV-PAS from wheat samples collected in Türkiye, using high-throughput sequencing. The complete genome sequence of the BYDV-PAS WO2-47-1 isolate and the nearly complete genome sequence of the TR60-S51 isolate are 5673 nt and 5629 nt in length, respectively. Sequence comparisons revealed that WO2-47-1 and TR60-S51 PAS isolates share the nucleotide identity range from 79.44 % to 98.68 % and 79.52 % to 98.74 % with isolates from Estonia, Ireland, and South Korea, respectively, and the amino acid identity range from 79.39 % to 97.75 % and 79.34 % to 96.52 % with isolates from Estonia, Ireland, and South Korea, respectively. Phylogenetic analysis indicated that WO2-47-1 and TR60-S51 wheat isolates clustered with European BYDV-PAS isolates, while remaining distinct from Korean, Australian, Canadian, and USA isolates. Further surveys conducted between 2022 and 2024 in Tekirdağ province revealed that 6 out of 50 wheat samples (12%) were infected with BYDV-PAS.

• Keywords: BYDV-PAS, pšenica, visoko zmogljivo sekvenciranje