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Kloniranje in izražanje podenote 8B rastlinskih RNA polimeraz II, IV in V
ID Cankar, Nina (Author), ID Taler-Verčič, Ajda (Mentor) More about this mentor... This link opens in a new window

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Abstract
Jod predstavlja enega od esencialnih elementov za vse vretenčarje in je v zmernih količinah koristen tudi za rastline, čeprav njegova vloga pri rastlinah še ni dobro raziskana. Ključno vlogo pri vretenčarjih ima kot sestavni del ščitničnih hormonov T3 in T4. Čeprav so v rastlinah odkrili analoge ščitničnih hormonov, mehanizem njihovega nastanka in pomen za rastlino še nista razjasnjena. Na podlagi značilnosti parov jodiranih tirozinskih aminokislinskih ostankov v tiroglobulinu, ki tvorijo ščitnične hormone, smo izbrali proteine navadnega repnjakovca (Arabidopsis thaliana), ki vsebujejo pare tirozinskih aminokislinskih ostankov z ustreznimi lastnostmi ter zapisa za dva od izbranih proteinov poskusili vstaviti v ekspresijski vektor za izražanje v E. coli. Zapis za podenoto 8B od DNA odvisnih RNA polimeraz II, IV in V (Rpb8) smo uspešno klonirali in rekombinantni protein izrazili ter očistili z Ni$^{2+}$ afinitetno kromatografijo. Očiščeni protein smo kemijsko jodirali, pri čemer je prišlo do agregacije proteina.

Language:Slovenian
Keywords:jod, ščitnični hormoni, tirozin, Arabidopsis thaliana
Work type:Bachelor thesis/paper
Typology:2.11 - Undergraduate Thesis
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2026
PID:20.500.12556/RUL-183563 This link opens in a new window
COBISS.SI-ID:284028419 This link opens in a new window
Publication date in RUL:15.06.2026
Views:99
Downloads:89
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Secondary language

Language:English
Title:Cloning and expression of subunit 8B plant RNA polymerases II, IV and V
Abstract:
Iodine is considered an essential element for all vertebrates and is also beneficial in moderate concentrations for plants, although its role in plants has not yet been sufficiently studied. For vertebrates, it is a crucial part of the thyroid hormones T3 and T4. Even though the presence of thyroid hormone analogues in plants has been confirmed, the mechanism of their synthesis and their role in plants are not yet fully understood. Considering the characteristics of hormonogenic pairs of iodinated tyrosine amino acid residues in thyroglobulin, we chose plant proteins from the mouse-ear cress (Arabidopsis thaliana) that contain pairs of tyrosine amino acid residues with similar characteristics. We tried to insert sequences encoding two of these plant proteins into an expression vector for expression in E. coli. Sequence encoding DNA-directed RNA polymerases II, IV and V subunit 8B (Rpb8) was successfully cloned, and the recombinant protein was expressed and purified via Ni$^{2+}$ affinity chromatography. The purified protein was chemically iodinated, which caused it to aggregate.

Keywords:iodine, thyroid hormones, tyrosine, Arabidopsis thaliana

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