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Določanje odpornosti pri virusu influence na zaviralce nevraminidaz
ID Rode, Katja (Author), ID Jevšnik Virant, Monika (Mentor) More about this mentor... This link opens in a new window

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Abstract
Virus influence (FLU) predstavlja enega izmed pomembnejših povzročiteljev okužb dihal in vsako leto predstavljajo znatno breme za javno zdravje. Prenaša se kapljično in primarno prizadene zgornja dihala. Pri ljudeh sta epidemiološko najpomembnejša virus influence A (FluA) in virus influence B (FluB). Želeli smo opredeliti pojavnost različnih vrst in antigenskih različic FLU ter prisotnost genotipske odpornosti na zaviralce nevraminidaz. Zanimalo nas je, ali je pojav odpornosti povezan s starostjo, imunskim statusom, posameznimi antigenskimi različicami virusa ter protivirusnem zdravljenju. V raziskavo smo vključili arhivske vzorce dihal bolnikov s potrjeno prisotnostjo FluA, poslane na Inštitut za mikrobiologijo in imunologijo Medicinske fakultete v Ljubljani. Prisotnost mutacije H275Y smo določali s pomnoževanjem 183 bp dolgega odseka gena za nevraminidazo in analizo alelne diskriminacije z RT-PCR v realnem času. Pri podtipu A(H1N1) smo pomnožili 621 bp in 358 bp dolga fragmenta gena za nevraminidazo, pri podtipu A(H3N2) pa 743 bp dolg odsek, katerim smo nukleotidno zaporedjo določili na genskem analizatorju. Med leti 2022 in 2025 smo potrdili izmenično sezonsko kroženje podtipov A(H1N1) in A(H3N2), medtem ko se je podtip FluB pojavljal le sporadično. Mutacijo H275Y smo pri podtipu A(H1N1) zaznali v manjšem deležu vzorcev, medtem ko pri podtipu A(H3N2) klinično pomembnih mutacij, povezanih z odpornostjo na zaviralce nevraminidaz, nismo zaznali. Mutacija H275Y se je pogosteje pojavljala pri starejših in z oseltamivirjem zdravljenih bolnikih, vendar jasne povezave z imunskim statusom ali zdravljenjem nismo dokazali. Opredelili smo nizko pojavnost genotipske odpornosti ter omejeno kroženje odpornih različic virusa v populaciji.

Language:Slovenian
Keywords:virusi, virus influence tipa A, zaviralci nevraminidaze, genotipska odpornost, RT-PCR v realnem času, določanje nukleotidnega zaporedja
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Publisher:[K. Rode]
Year:2026
PID:20.500.12556/RUL-182902 This link opens in a new window
UDC:578.2:616.921.5
COBISS.SI-ID:279768579 This link opens in a new window
Publication date in RUL:28.05.2026
Views:273
Downloads:222
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Secondary language

Language:English
Title:Determination of influenza virus resistance to neuraminidase inhibitors
Abstract:
Influenza virus (FLU) is a major cause of respiratory tract infections and remains a substantial public health burden. It is transmitted via respiratory droplets and primarily affects the upper respiratory tract. In humans, influenza virus A (FluA) and influenza virus B (FluB) are the most epidemiologically relevant types. The prevalence of different FLU types and antigenic variants, as well as the presence of genotypic resistance to neuraminidase inhibitors, were investigated. Possible associations between antiviral resistance and age, immune status, specific antigenic virus variants, and antiviral treatment were evaluated. Archived respiratory samples from patients with laboratory-confirmed FluA infection, submitted to the Institute of Microbiology and Immunology, Faculty of Medicine, University of Ljubljana, were included in the study. The H275Y mutation was detected by amplification of 183 bp fragment of the neuraminidase gene, followed by allele discrimination analysis using real-time RT-PCR. For subtype A(H1N1), 621 bp and 358 bp fragments of the neuraminidase gene were amplified, while a 743 bp fragment was amplified for subtype A(H3N2). Nucleotide sequences were determined using a genetic analyzer. Between 2022 and 2025, alternating seasonal circulation of subtypes A(H1N1) and A(H3N2) was confirmed, whereas FluB occurred sporadically. The H275Y mutation was detected in a small proportion of A(H1N1) samples, while no clinically relevant resistance-associated mutations were identified in A(H3N2). The H275Y mutation was more frequently observed in older patients and in those treated with oseltamivir; however, no statistically significant association with immune status or treatment was demonstrated. Overall, a low prevalence of genotypic resistance with limited circulation of resistant viral variants in the population was identified.

Keywords:viruses, influenza A virus, neuraminidase inhibitors, genotypic resistance, real-time RT-PCR, sequencing

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