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Razvoj oblik proteina Ninjurin 1 za nadzorovano sprožitev celične smrti
ID Hvalič, Aneja (Author), ID Hafner Bratkovič, Iva (Mentor) More about this mentor... This link opens in a new window

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Abstract
NINJ1 posreduje poškodbo celične membrane (PMR), ki predstavlja zadnji korak pri imunogeni celični smrti (ICD), pri kateri pride do sproščanja znotrajceličnih komponent. Te spodbudijo imunski odziv, kar odpira možnosti za uporabo nadzorovane celične smrti (RCD) v terapevtske namene, kot je zdravljenje imunogenih rakavih tumorjev. V magistrskem delu smo razvijali oblike proteina NINJ1, ki bi omogočile nadzorovano celično smrt preko poškodbe plazemske membrane. V eksperimentalnem delu smo se osredotočili na razvoj zaklenjenih konstruktov NINJ1, pri katerih smo na N- in C-konec NINJ1 dodali segmente in domene, ki homo- ali heterodimerizirajo. Ti konstrukti so bili načrtovani tako, da bi jih lahko odpirali na različne načine. Učinkovitost smo preverjali glede na citotoksičnost divjega tipa proteina NINJ1. Transficirali smo celice HEK293T in potrdili izražanje vseh načrtovanih konstruktov s prenosom western in encimsko-imunskim testom. Citotoksičnost smo merili s testom privzema propidijevega jodida. Rezultati so potrdili, da prekomerno izražanje NINJ1 vodi v PMR in posledično celično smrt. Pri testiranju citotoksičnosti zaprtih konstruktov NINJ1 v primerjavi z divjim tipom proteina nismo pridobili statistično značilnih razlik. Kljub negativnim rezultatom smo s pomočjo novih objavljenih študij o strukturi NINJ1 pripravili smernice za nadaljnji razvoj konstruktov, ki bi bili prilagojeni tudi za aktivacijo v tumorskem mikrookolju.

Language:Slovenian
Keywords:Ninjurin 1, NINJ, poškodba plazemske membrane, PMR, nadzorovana celična smrt
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Year:2025
PID:20.500.12556/RUL-175530 This link opens in a new window
COBISS.SI-ID:255629059 This link opens in a new window
Publication date in RUL:01.11.2025
Views:144
Downloads:25
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Secondary language

Language:English
Title:Design of engineered Ninjurin-1 variants for controlled induction of cell death
Abstract:
NINJ1 mediates plasma membrane rupture (PMR), the final step in immunogenic cell death (ICD), which results in the release of intracellular components. These components stimulate an immune response, thereby opening possibilities for the therapeutic use of regulated cell death (RCD), such as in the treatment of immunogenic tumours. The main aim of this master’s thesis was to develop variants of the NINJ1 protein that facilitate controlled cell death through plasma membrane disruption. In the experimental work, we focused on developing locked NINJ1 constructs by adding homo- or heterodimerising segments and domains to the N- and C-termini of NINJ1. These constructs were designed to enable inducible activation through different mechanisms. Their effectiveness was evaluated in comparison with the cytotoxicity of wild-type NINJ1. We transfected HEK293T cells and confirmed the expression of all designed constructs using western blotting and an enzyme-linked immunosorbent assay (ELISA). Cytotoxicity was measured using a propidium iodide uptake assay. Our results confirmed that overexpression of NINJ1 induces PMR and consequently cell death. When testing the cytotoxicity of the locked NINJ1 constructs in comparison with the wild-type protein, no statistically significant differences were observed. Despite the negative results, recently published studies on NINJ1 structure enabled us to prepare guidelines for further construct optimisation, including tailoring activation to the tumour microenvironment.

Keywords:Ninjurin 1, NINJ1, plasma membrane rupture, PMR, regulated cell death

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