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Določanje protibiofilmskega delovanja knjižnice spojin Fakultete za farmacijo Univerze v Ljubljani na Pseudomonas aeruginosa
ID Rabzelj, Karmen (Author), ID Hrast Rambaher, Martina (Mentor) More about this mentor... This link opens in a new window, ID Golob, Majda (Comentor)

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Abstract
Biofilmi predstavljajo eno glavnih težav sodobnega zdravstva, saj zaradi svoje odpornosti proti antibiotikom in imunskim sistemom gostitelja otežujejo zdravljenje okužb. Takšen način rasti omogoča bakterijam preživetje v neugodnih razmerah ter prispeva k nastanku kroničnih in ponavljajočih se okužb. Okužb, povezane z biofilmi, so posebej problematične v kliničnem okolju, kjer se pogosto pojavijo na površinah medicinskih pripomočkov, kot so katetri, umetni sklepi in vsadki, pa tudi v telesnih tkivih. Ena izmed najbolj raziskanih in klinično pomembnih bakterij, ki tvorijo biofilm, je vrsta Pseudomonas aeruginosa. Gre za bakterijo, ki je sposobna tvoriti goste in organizirane biofilme, odporne proti številnim antibiotikom, zaradi česar je pogost povzročitelj bolnišničnih okužb, zlasti pri bolnikih z oslabljenim imunskim sistemom. Namen magistrske naloge je bil ovrednotiti protibiofilmski potencial spojin iz knjižnice spojin Fakultete za farmacijo Univerze v Ljubljani ter hkrati prispevati k razvoju metode za kvantifikacijo biofilma. Eden izmed ciljev je bila tudi optimizacija metode določanja protibiofilmskega delovanja izbranih spojin. Knjižnica je bila testirana na bakteriji vrste P. aeruginosa z namenom odkriti spojine, ki bi lahko zavirale tvorbo biofilma. Za kvantifikacijo biofilma smo uporabili metodo barvanja s kristal vijoličnim in določili delež njegove rasti z merjenjem absorbance pri 584 nm. Rezultati testiranj so pokazali, da nobena izmed testiranih spojin ni statistično značilno zavirala tvorbe biofilma v primerjavi s kontrolo. Kljub temu pa raziskava ponuja pomemben vpogled v vedenje bakterije P. aeruginosa v prisotnosti različnih kemijskih struktur, kar pomaga razumeti, kako bakterija reagira na različne spojine in zakaj zaviranje biofilma predstavlja velik izziv. Pomembno je poudariti, da smo z raziskavo uspeli vzpostaviti visokozanesljivo metodo, ki je primerna za nadaljnje testiranje večjih knjižnjic spojin in ima velik potencial za identifikacijo novih protibiofilmkih učinkovin. S tem potrjujemo zanesljivost uporabljenega eksperimentalnega modela, čeprav rezultati zaradi omejenega nabora spojin enkratnega testiranja ostajajo manj robustni. Takšni rezultati so kljub temu pomembni za oblikovanje prihodnjih strategij pri načrtovanju in testiranju novih protibiofilmskih spojin, saj nakazujejo na potrebo po večjih knjižnicah spojin, ponovljenih testiranjih ter razumevanju mehanizmov odpornosti biofilmov. Magistrsko delo tako prispeva k nadaljnjemu razumevanju izzivov, povezanih z razvojem učinkovin proti biofilmskim okužbam.

Language:Slovenian
Keywords:biofilm, Pseudomonas aeruginosa, protibiofilmske spojine, kristal vijolično
Work type:Master's thesis/paper
Organization:FFA - Faculty of Pharmacy
Year:2025
PID:20.500.12556/RUL-173325 This link opens in a new window
Publication date in RUL:16.09.2025
Views:186
Downloads:64
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Secondary language

Language:English
Title:Antibiofilm activity determination of compounds library of the Faculty of Pharmacy University of Ljubljana against Pseudomonas aeruginosa
Abstract:
Biofilms represent one of the main challenges in modern healthcare, as their resistance to antibiotics and the host immune system significantly complicates infection treatment. This mode of bacterial growth enables microorganisms to survive under unfavourable conditions and contributes to the development of chronic and recurrent infections. Biofilm-associated infections are particularly problematic in clinical settings, where biofilms frequently form on the surfaces of medical devices such as catheters, prosthetic joints, and implants, as well as within body tissues. One of the most extensively studied and clinically significant biofilm-forming bacteria is Pseudomonas aeruginosa. This bacterium is capable of forming dense and organized biofilms that are highly resistant to a wide range of antibiotics, making it a common cause of hospital-acquired infections, especially in immunocompromised patients. The aim of this master’s thesis was to evaluate the antibiofilm potential of compounds from chemical library provided by the Faculty of Pharmacy, University of Ljubljana, and at the same time contribute to the development of a method for biofilm quantification. One of the goals was also the optimization of the method for determining the anti-biofilm activity of selected compounds. The library was tested against P. aeruginosa with the goal of identifying compounds capable of inhibiting biofilm formation. To quantify biofilm biomass, the crystal violet staining method was used, and biofilm growth was assessed by measuring absorbance at 584 nm. The results of the screening showed that none of the tested compounds significantly inhibited biofilm formation compared to the control. Nevertheless, the study provides important insights into the behaviour of P. aeruginosa in the presence of various chemical structures, helping to explain how the bacterium responds to different compounds and why inhibiting biofilm formation remains a significant challenge. It is important to emphasize that the study successfully established a highly reliable method suitable for further testing of larger compound libraries, with great potential for the identification of new anti-biofilm agents. This also confirms the reliability of the experimental model used, although the results are less robust due to the limited compound library and single-round testing. Nevertheless, these findings are valuable for shaping future strategies in the design and evaluation of new antibiofilm agents, highlighting the need for larger libraries, repeated testing, and a better understanding of biofilm resistance mechanisms. This master’s thesis thus contributes to a deeper understanding of the challenges associated with developing effective agents against biofilm-related infections.

Keywords:biofilm, Pseudomonas aeruginosa, antibiofilm compounds, crystal violet

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