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Reološki opis modelnih simbiotičnih in disbiotičnih biofilmov
ID Merhar, Martin (Author), ID Stopar, David (Mentor) More about this mentor... This link opens in a new window, ID Gašperšič, Rok (Reviewer)

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Abstract
Bakterije ustne mikrobiote na zobeh tvorijo biofilme, ki lahko ob prehodu v disbiozo povzročajo parodontitis. Z mešanim inokulumom sestavljenim iz 14 različnih bakterijskih vrst, ki naseljujejo ustno votlino, smo v in vitro modelnih sistemih vzgojili različne biofilme in jih reološko opisali. Z gojenjem pri anaerobnih ali mikroaerofilnih pogojih smo dobili dve različni sestavi mikrobne združbe, ki ju nismo uspeli enoznačno pripisati disbiotičnim ali simbiotičnim zobnim biofilmom. Z oscilacijskim amplitudnim testom smo opisali njihov reološki odziv v linearnem in nelinearnem območju. Rezultati kažejo, da imajo anaerobno gojeni biofilmi večjo čvrstost gelske strukture, do rušenja strukture prihaja pri večjih strižnih deformacijah, po začetnem porušenju pride do hitrejšega kolapsa strukture, ter imajo večje znotrajciklično strižno mehčanje in večjo deformacijsko togost z naraščajočo strižno deformacijo. Dobljeni rezultati postavljajo dobre temelje za optimizacijo in vitro modelov zobnih biofilmov v prihodnosti.

Language:Slovenian
Keywords:mikrobne združbe, zobni biofilmi, parodontitis, reologija, LAOS, viskoelastičnost
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Publisher:[M. Merhar]
Year:2025
PID:20.500.12556/RUL-173211 This link opens in a new window
UDC:579.61:616.314:579.26:544
COBISS.SI-ID:248873475 This link opens in a new window
Publication date in RUL:14.09.2025
Views:185
Downloads:68
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Secondary language

Language:English
Title:Rheological characterization of symbiotic and disbiotic biofilms
Abstract:
Oral microbiota bacteria form biofilms that can cause periodontitis when they become dysbiotic. With a mixed inoculum consisting of 14 different bacterial species that inhabit the oral cavity, we cultivated distinct biofilms in in vitro model systems and characterized them rheologically. By growing biofilms under anaerobic or microaerophilic conditions, we obtained two different compositions of the microbial community, but were unable to uniquely attribute the structure to dysbiotic or symbiotic dental biofilms. Using an oscillatory amplitude test, we characterized their rheological response in the linear and nonlinear range. The results show that anaerobically grown biofilms have a higher gel structure strength, structural collapse occurs at higher shear deformations, after the initial collapse the structure collapses more quickly, and they have greater intracyclic shear softening and greater shear stiffening with increasing shear deformation. The obtained results lay a good foundation for optimizing in vitro models of dental biofilms in the future.

Keywords:microbial communities, dental biofilms, periodontitis, rheology, LAOS, viscoelasticity

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