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Priprava rekombinantnega proteasoma hipertermofilne arheje Aeropyrum pernix
ID Košir, Lina (Author), ID Poklar Ulrih, Nataša (Mentor) More about this mentor... This link opens in a new window, ID Bahun, Miha (Comentor)

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Abstract
Diplomsko delo obravnava celično proteostazo – homeostazo proteinov, ki je ključnega pomena za ohranjanje preživetja celic. Gre za dinamično ravnovesje med sintezo, zvijanjem in razgradnjo celičnih proteinov. Predstavljeni so glavni sestavni deli sistema proteostaze, kot so molekularni šaperoni, ubikvitin proteasomski sistem ter lizosomsko avtofagni sistem. Podrobneje je opisan proteasom, njegovo delovanje pri evkariontih in prokariontih ter vpliv staranja na učinkovitost teh sistemov. V nalogi so izpostavljene povezave med spremembami v proteostazi in pojavom bolezni, kot so Alzheimerjeva bolezen, Parkinsonova bolezen in rak. V sklopu naloge smo pripravili rekombinantne podenote proteasoma hipertermofilne arheje Aeropyrum pernix. Ustrezne gene za dve podenoti alfa in eno podenoto beta jedrnega dela proteasoma smo pomnožili iz kromosoma A. pernix in jih vstavili v ekspresijski plazmidni vektor za sintezo rekombinantnih proteinov v bakterijah Escherichia coli. Sintetizirane podenote proteasoma smo delno očistili iz bakterij s segrevanjem celičnih lizatov. Pokazali smo, da podenota alfa v kombinaciji s podenoto beta razgrajuje preprosti peptidni substrat pri temperaturi 80 °C.

Language:Slovenian
Keywords:avtofagija, bolezni staranja, Escherichia coli, NaDS-PAGE, proteasom, proteostaza, šaperoni
Work type:Bachelor thesis/paper
Typology:2.11 - Undergraduate Thesis
Organization:BF - Biotechnical Faculty
Year:2025
PID:20.500.12556/RUL-172927 This link opens in a new window
COBISS.SI-ID:248966915 This link opens in a new window
Publication date in RUL:12.09.2025
Views:154
Downloads:21
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Secondary language

Language:English
Title:Preparation of recombinant proteasome of the hyperthermophylic archaeon Aeropyrumpernix
Abstract:
The thesis deals with cellular proteostasis – protein homeostasis, which is crucial for maintaining cell survival. It is a dynamic balance between the synthesis, folding, and degradation of cellular proteins. The main components of the proteostasis system are presented, such as molecular chaperones, the ubiquitin-proteasome system, and the lysosomal autophagy system. The proteasome is described in detail, its function in eukaryotes and prokaryotes, and the effect of aging on the efficiency of these systems. The paper highlights the links between changes in proteostasis and the onset of diseases such as Alzheimer's disease, Parkinson's disease, and cancer. As part of the thesis, we prepared recombinant subunits of the proteasome of the hyperthermophilic archaeon Aeropyrum pernix. The corresponding genes for two alpha subunits and one beta subunit of the core proteasome were amplified from the A. pernix chromosome and inserted into an expression plasmid vector for the synthesis of recombinant proteins in Escherichia coli bacteria. The synthesized proteasome subunits were partially purified from bacteria by heating the cell lysates. We showed that the alpha subunit in combination with the beta subunit degrades a simple peptide substrate at a temperature of 80 °C.

Keywords:age – related diseases, autophagy, Escherichia coli, molecular chaperones, proteasome, proteostasis

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