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Identifikacija determinant profaga GIL01, ki vplivajo na sporulacijo bakterije Bacillus thuringiensis serovar israelensis
ID Ogrin, Ana (Author), ID Butala, Matej (Mentor) More about this mentor... This link opens in a new window

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Abstract
Bakteriofag GIL01 je temperatni fag iz družine Tectiviridae, ki inficira bakterijo Bacillus thuringiensis serovar israelensis. Po okužbi obstaja v gostiteljski celici kot linearni profag, ki se pomnožuje neodvisno od bakterijskega kromosoma. Genom GIL01 obsega 14931 bp in 30 ORF. Geni, katerih produkti sodelujejo pri skupnih procesih, so locirani skupaj na genomu. Tandemska promotorja P1 in P2 regulirata izražanje genov za replikacijo in transkripcijo genoma GIL01 (ORF1-ORF8). Promotor P3 regulira izražanje genov za prepoznavo gostitelja, sestavljanje kapside in lizo gostiteljske celice (ORF9-ORF30). V promotorskih regijah so štiri vezavna mesta za transkripcijski represor LexA t.i. dinBox, ki so pomembna za vzpostavitev lizogenije GIL01. Na koncih genoma GIL01 so terminalne ponovitve, dolge 73 bp, na katere je kovalentno vezan terminalni protein in služijo pri replikaciji genoma. Produkti bakteriofagov lahko regulirajo sporulacijo gostiteljske celice. Bakterijske spore nudijo bakteriofagom zaščito in možnost popravljanja DNA ter možnost boljšega prenosa bakteriofagov v okolju. Predhodni rezultati na Katedri za biokemijo so pokazali, da lizogenija GIL01 sicer asporogenemu sevu Bacillus thuringiensis serovar israelensis GBJ002 povrne zmožnost sporulacije. Determinanta oz. regulator profaga GIL01, ki vpliva na sporulacijo, še ni identificirana. Pričakovali smo, da se regulator sporulacije B. thuringiensis serovar israelensis nahaja v prvem operonu (ORF1-ORF8), v regulatorni domeni genoma profaga GIL01. Z molekulskim kloniranjem odsekov genoma GIL01 ORF1-ORF8, P1P2ORF1-ORF8, ORF9-ORF22 in ORF23-ORF30 v plazmidni vektor pDG148 in testom sporulacije smo pokazali, da je za regulacijo sporulacije potreben celoten genom GIL01 oz. lizogenija GIL01. Izražanje genskih produktov ORF1-8 ali ORF9-22 ali ORF23-30 ima negativen učinek na rast gostiteljske celice.

Language:Slovenian
Keywords:bakteriofagi, temperatni bakteriofag GIL01, sporulacija, Bacillus thuringiensis serovar israelensis
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Publisher:[A. Ogrin]
Year:2024
PID:20.500.12556/RUL-161848 This link opens in a new window
UDC:578.347:579.852.11:579.22
COBISS.SI-ID:207706883 This link opens in a new window
Publication date in RUL:15.09.2024
Views:37
Downloads:35
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Secondary language

Language:English
Title:Identification of GIL01 prophage determinants affecting the sporulation process of Bacillus thuringiensis serovar israelensis
Abstract:
The bacteriophage GIL01 is a temperate phage of the Tectiviridae family that infects the bacterium Bacillus thuringiensis serovar israelensis. GIL01 is a linear prophage that replicates independently of the bacterial chromosome. The genome of GIL01 comprises of 14931 bp and 30 ORF. Genes with similar function are located together. The P1 and P2 promoters regulate the expression of genes for genome replication and transcription (ORF1-ORF8). The P3 promoter regulates the expression of genes for host recognition, assembly of the capsid, and lysis of the host (ORF9-ORF30). The promotor regions carry four binding sites for the host transcription repressor LexA, named as dinBox sites that are important for GIL01 lysogeny. The ends of GIL01 genome carry 73 bp terminal repeats with covalently bound terminal proteins that are important for genome replication. The bacteriophage gene products can regulate host sporulation. Bacterial spores provide bacteriophages protection and enable DNA repair in spores, as well as a means of phage dissemination. Previous results at the Department of Biochemistry have shown that GIL01 lysogeny restores sporulation of the otherwise asporogenic strain Bacillus thuringiensis serovar israelensis GBJ002. The determinant or regulator of GIL01 that influences host sporulation has not yet been identified. The GIL01 sporulation regulator of B. thuringiensis serovar israelensis was expected to be located in the first operon (ORF1-ORF8), in the regulatory domain of the GIL01 genome. By molecular cloning of the GIL01 genomic regions ORF1-ORF8, P1P2ORF1-ORF8, ORF9-ORF22 and ORF23-ORF30 into the plasmid vector pDG148 and the sporulation test, we showed that the entire GIL01 genome or GIL01 lysogeny is required for sporulation regulation. Expression of the ORF1-ORF8 or ORF9-ORF22 or ORF23-ORF30 gene products has a negative effect on host cells.

Keywords:bacteriophages, temperate bacteriophage GIL01, sporulation, Bacillus thuringiensis serovar israelensis

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