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Vloga nabitih segmentov pri kanonični aktivaciji inflamasoma NLRP3
ID Glavič, Kim (Author), ID Hafner Bratkovič, Iva (Mentor) More about this mentor... This link opens in a new window, ID Župunski, Vera (Co-mentor)

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Abstract
Prirojena imunost predstavlja prvo obrambno črto pred patogenimi organizmi. Do aktivacije določenih receptorjev naravne imunosti pa lahko pride tudi v odsotnosti mikrobov ali njihovih komponent. NLRP3 je citosolni senzor prirojene imunosti, ki omogoča zaznavo številnih patogenih in endogenih molekulskih vzorcev. Po aktivaciji z raznolikimi aktivatorji, NLRP3 oligomerizira in pritegne adapterski protein ASC ter efektorski protein prokaspazo 1, kar vodi v avtoproteolitično aktivacijo prokaspaze 1, ki nato cepi citokina pro-IL-1β in pro-IL-18 v njuno zrelo obliko. Substrat kaspaze 1 je tudi protein gasdermin D, čigar N-končni del tvori pore v membrani, kar vodi v celično smrt, imenovano piroptoza. Neuravnavano delovanje inflamasoma NLRP3 je povezano s številnimi kroničnimi vnetnimi, metabolnimi in nevrodegenerativnimi boleznimi. Mehanizem aktivacije inflamasoma NLRP3 še ni pojasnjen, a v zadnjih letih številne študije navajajo pomembnost celične lokacije NLRP3 pri aktivaciji. Nedavno so pokazali, da do sestavljanja inflamasoma NLRP3 lahko pride tudi na membrani razstavljenega trans-Golgijevega aparata, na katero naj bi se NLRP3 lokaliziral preko pozitivno nabitega segmenta NLRP3(127-130). Segment se nahaja v predelu NLRP3, ključnem za zaznavanje iztoka kalijevih ionov, ki je skupen celični dogodek številnih kanoničnih aktivatorjev NLRP3. Ker je nejasno, kakšen je mehanizem aktivacije inflamasoma NLRP3, in ali k temu prispeva tudi celična lokacija proteina, smo želeli opredeliti vlogo segmenta NLRP3(127 130) pri aktivaciji različno lokaliziranih NLRP3. Da bi pojasnili, ali je vloga segmenta NLRP3(127-130) pomembna le za lokacijo NLRP3 ali tudi za primeren odziv na aktivatorje, smo pozitivno nabit segment NLRP3(127-130) pri predhodno pripravljenih konstruktih NLRP3, ki omogočajo lokalizacijo na različne organele, mutirali v zaporedje štirih alaninov in pripravljene konstrukte stabilno vnesli v makrofage z izbitim genom za NLRP3. Ugotovili smo, da aktivacija umetno lokaliziranih variant NLRP3 poteče kljub prisotnosti mutacije 4×A, medtem ko uvedba enake spremembe v nelokaliziranem NLRP3 onemogoči njegovo aktivacijo. Omenjena mutacija nima vpliva na aktivnost konstitutivno aktivnih variant NLRP3. V okviru magistrskega dela smo ugotovili, da segment NLRP3(127-130) ne vpliva na zmožnost aktivacije lokaliziranega NLRP3 ob stimulaciji z različnimi aktivatorji kanonične poti. Vloga pozitivnega segmenta NLRP3(127-130) je pretežno v vezavi NLRP3 na organele, pri čemer pride do povečanja koncentracije molekul NLRP3, kar omogoči nadaljnje korake aktivacije.

Language:Slovenian
Keywords:NLRP3, inflamasom, lokalizacija, aktivacija, nabiti segment
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2023
PID:20.500.12556/RUL-152129 This link opens in a new window
COBISS.SI-ID:176582147 This link opens in a new window
Publication date in RUL:07.11.2023
Views:440
Downloads:52
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Secondary language

Language:English
Title:The role of charged segments in canonical NLRP3 inflammasome activation
Abstract:
Innate immunity is the first line of defence against pathogens. However, activation of certain receptors of innate immunity can also occur in the absence of microbes or their components. NLRP3 is a cytosolic innate immunity sensor that allows the detection of a wide range of pathogenic and endogenous molecular patterns. Upon activation by a variety of activators, NLRP3 oligomerises and recruits the adaptor protein ASC and the effector protein pro-caspase-1, leading to the autoproteolytic activation of pro-caspase-1, which in turn cleaves the cytokines pro-IL-1β and pro-IL-18 into their mature form. The substrate of caspase-1 is also the protein gasdermin D, the N-terminal part of which forms pores in the membrane, leading to cell death called pyroptosis. Dysregulated NLRP3 inflammasome activity is associated with many chronic inflammatory, metabolic and neurodegenerative diseases. The mechanism of NLRP3 inflammasome activation is still unclear. In recent years, a number of studies have suggested the importance of NLRP3 cellular location in its activation. It has been shown that NLRP3 inflammasome assembly can also occur at the disassembled trans-Golgi apparatus, to which NLRP3 is thought to localise via a positively charged segment of NLRP3(127-130). This segment is located in a region of NLRP3 crucial for the detection of potassium ion efflux, a common cellular event of many canonical NLRP3 activators. Since it is unclear what the mechanism of NLRP3 inflammasome activation is and whether the cellular location of the protein also contributes to this, we wanted to define the role of the NLRP3(127-130) segment in the activation of differentially localised NLRP3. To clarify whether the role of the NLRP3(127-130) segment is relevant only for NLRP3 localisation or also for the appropriate response to activators, we mutated the positively charged NLRP3(127-130) segment of NLRP3(127 130) in previously prepared NLRP3 constructs with engineered localisation to different organelles, into a sequence of four alanines and stably integrated these NLRP3 variants into macrophages. We found that the artificially localised NLRP3 variants can be activated despite the presence of the 4×A mutation, while introducing the same change in a non-localised NLRP3 prevents its activation. The mutation had no effect on the activity of the constitutively active NLRP3 variants. In the master thesis, we showed that the NLRP3(127-130) segment does not affect the ability to activate the localised NLRP3 upon stimulation with different activators of the canonical pathway. We can conclude that NLRP3(127-130) segment enables binding of NLRP3 to organelles and thus facilitates an increase in local concentration of NLRP3 molecules and further activation steps.

Keywords:NLRP3, inflammasome, localisation, activation, charged segment

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