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Biotehnološki potencial ekstremotolerantnih gliv za biokontrolo in razgradnjo plastike : doktorska disertacija
ID Černoša, Anja (Author), ID Gunde Cimerman, Nina (Mentor) More about this mentor... This link opens in a new window, ID Gostinčar, Cene (Comentor)

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Abstract
Ekstremotolerantne glive imajo velik biotehnološki potencial, vendar pa so nekatere tudi oportunistični patogeni človeka. V tem delu smo ovrednotili možnosti njihove uporabe v biokontroli in za razgradnjo plastike ter ocenili, kako varna je njihova uporaba. Ugotovili smo, da so sevi arktične črne kvasovke Aureobasidium subglaciale vsaj tako dobri ali celo boljši za biokontrolo kot komercialni biokontrolni sevi Aureobasidium pullulans. Izolirali in karakterizirali smo zunajcelične vezikle (ZV) glive A. pullulans ter ugotovili, da povzročajo manjše spremembe morfologije fitopatogenih gliv Penicillium expansum in Colletotrichum acutatum. Niti A. pullulans, niti A. subglaciale ne rasteta pri temperaturi 37 °C, zaradi česar je njuna uporaba varna, kar pa ne drži za vrsto Aureobasidium melanogenum. Slednja ima poleg tega tudi druge dejavnike virulence (npr. sinteza sideroforov in hemolitična aktivnost), ki smo jih potrdili s fenotipsko in genomsko analizo več deset sevov te vrste. Izolirali smo ZV A. melanogenum, jih razdelili v frakciji z melaninom in brez njega ter pokazali, da nobena od frakcij nima citotoksičnega vpliva na celice celične linije SH-SY5Y. S testiranjem več vrst gliv smo ugotovili, da vrsti Coniochaeta hoffmannii in Pleurostoma richardsiae delno razgrajujeta polipropilen (PP), še zlasti če je ta predhodno podvržen fotokatalizi, in to potrdili z Ramansko spektroskopijo in FTIR-ATR. Lastnosti, zaradi katerih so ekstremotolerantne glive zanimive v biotehnologiji, se pogosto prekrivajo s tistimi, ki omogočajo patogenezo. S karakterizacijo lastnosti ekstremotolerantnih gliv lahko učinkoviteje identificiramo najboljše seve za biokontrolo in razgradnjo plastike ter hkrati prepoznamo potencialne oportunistične patogene in jih izločimo iz biotehnološke uporabe.

Language:Slovenian
Keywords:ekstremotolerantne glive, razgradnja plastike, biokontrola, patogeneza
Work type:Doctoral dissertation
Typology:2.08 - Doctoral Dissertation
Organization:BF - Biotechnical Faculty
Publisher:[A. Černoša]
Year:2023
PID:20.500.12556/RUL-151839 This link opens in a new window
UDC:579.6+602.3:582.28
COBISS.SI-ID:169408003 This link opens in a new window
Publication date in RUL:22.10.2023
Views:493
Downloads:0
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Secondary language

Language:English
Title:Biotechnological potential of extremotolerant fungi for biocontrol and degradation of plastics : doctoral dissertation
Abstract:
Extremotolerant fungi have great biotechnological potential, but some are also opportunistic human pathogens. In this work, we investigated the potential of their use in biocontrol and biodegradation of plastics and evaluated how safe their use is. We found that strains of the Arctic black yeast Aureobasidium subglaciale are at least as good or even better for biocontrol than the commercial biocontrol strains Aureobasidium pullulans. We have isolated and characterized the extracellular vesicles (EVs) from the fungus A. pullulans and found that they cause some changes in the morphology of the phytopathogenic fungi Penicillium expansum and Colletotrichum acutatum. Neither A. pullulans nor A. subglaciale grow at 37 °C, so they can be used safely, which is not the case for Aureobasidium melanogenum. The latter also has other virulence factors (e.g., synthesis of siderophores and hemolytic activity), which were confirmed by phenotypic and genomic analyzes of dozens of strains of this species. We isolated EVs from A. melanogenum and prepared a fraction with and a fraction without melanin and showed that neither fraction had a cytotoxic effect on cells of the SH-SY5Y cell line. By testing different fungal species, we found that the species Coniochaeta hoffmannii and Pleurostoma richardsiae partially degraded polypropylene (PP), especially when it was previously subjected to photocatalysis, which was confirmed by Raman spectroscopy and FTIR-ATR. The properties that make such extremotolerant fungi interesting for biotechnology often overlap with those used in pathogenesis. By characterizing the properties of extremotolerant fungi, we can effectively identify the best strains for biocontrol and plastic degradation while identifying and excluding potential opportunistic pathogens from biotechnological use.

Keywords:extremotolerant fungi, plastic degradation, biocontrol, pathogenesis

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