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Določanje termodinamske stabilnosti riboza-fosfat pirofosfokinaze iz Escherichie coli
ID Popovič, Špela (Author), ID Hadži, San (Mentor) More about this mentor... This link opens in a new window

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Abstract
Encim riboza-fosfat pirofosfokinaze ali PRPP sintetaza katalizira pretvorbo riboze-5-fosfat v fosforibozil pirofosfat, ki je prekurzor za sintezo purinskih in pirimidinskih nukleotidov. Gre za esencialen encim, ki je dobro ohranjen in ga najdemo tako pri bakterijskih organizmih kot pri človeku. V diplomskem delu smo izvedli kemijsko denaturacijo sečnine in le-to spremljali s CD spektroskopijo. CD spektri kažejo obliko značilno za alfa-helični protein, in da se pri visoki koncentraciji sečnine poruši večina njegove sekundarne strukture. Denaturacija s sečnino je reverzibilna. Denaturacijske krivulje določene s CD spektroskopijo ne kažejo odvisnosti od koncentracije proteina. Z analizo denaturacijskih krivulj smo določili termodinamsko stabilnost PRPP sintetaze (standardna Gibbsova prosta energija denaturacije) ki znaša 9,7 kJ/mol.

Language:Slovenian
Keywords:denaturacija, PRPP sintetaza, termodinamska stabilnost, CD spektroskopija
Work type:Bachelor thesis/paper
Typology:2.11 - Undergraduate Thesis
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2023
PID:20.500.12556/RUL-149695 This link opens in a new window
COBISS.SI-ID:169295107 This link opens in a new window
Publication date in RUL:08.09.2023
Views:462
Downloads:16
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Secondary language

Language:English
Title:Thermodynamics stability of Ribose-phosphate pyrophosphokinase from Escherichia coli
Abstract:
The enzyme ribose-phosphate pyrophosphokinase or PRPP synthetase catalyzes the conversion of ribose-5-phosphate to phosphoribosyl pyrophosphate, which is a precursor for the synthesis of purine and pyrimidine nucleotides. It is an essential enzyme that is well conserved and is found in both bacterial organisms and humans. In the thesis, we carried out the chemical denaturation of urea and monitored it with CD spectroscopy. The CD spectra show characteristic of alpha-helical protein, and that at high concentration of urea most of its secondary structure is destroyed. Denaturation by urea is reversible. Denaturation curves determined by CD spectroscopy show no dependence on protein concentration. By analyzing denaturation curves, we determined the thermodynamic stability of PRPP synthetase (standard Gibbs free energy of denaturation), which amounts to 9,7 kJ/mol.

Keywords:denaturation, PRPP sythetaze, thermodynamic stability, CD spectroscopy

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