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Nelokalni model strukture epitelijskega tkiva
ID Železnik, Urban (Author), ID Ziherl, Primož (Mentor) More about this mentor... This link opens in a new window

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Abstract
Enoslojna epitelijska tkiva tvorijo tesno zložene celice, ki na apikalni strani oblikujejo poligonsko tlakovanje. Strukturo teh tkiv lahko opišemo z dvorazsežnim modelom s površinsko in linijsko elastičnostjo, ki temelji na fizikalnih značilnostih celične notranjosti in stikov med celicami. V tem delu površinski člen v energiji predelamo tako, da omogočimo spreminjanje preferenčne ploščine celic na račun sosed, kar ustreza izmenjavi snovi med celicami. Tako razširjeni model, dopolnjen z značilnimi dinamičnimi procesi kot so celične delitve, smrti in topološki prehodi T1, analiziramo numerično v ogliščni upodobitvi. Rezultate primerjamo z eksperimentalnimi podatki in dosedanjimi modeli ter preverimo veljavnost Lewisovega in Aboav-Weairovega zakona. Z razmerjem ploščine in obsega opišemo izometričnost celic v tlakovanju. Podrobno razčlenimo topološke lastnosti in dinamiko epitelijskih tlakovanj v različnih delih diagrama stanj.

Language:Slovenian
Keywords:epitelijsko tkivo, celica, razurejeno tlakovanje, poligonski razred, delitev celic, celična smrt, topološki prehod
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:FMF - Faculty of Mathematics and Physics
Year:2023
PID:20.500.12556/RUL-149105 This link opens in a new window
COBISS.SI-ID:163036931 This link opens in a new window
Publication date in RUL:03.09.2023
Views:772
Downloads:44
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Secondary language

Language:English
Title:Nonlocal model of structure of epithelial tissues
Abstract:
Simple epithelial tissues consist of tightly packed cells that form a polygonal tiling on the apical side. The structure of these tissues can be described by a two-dimensional area- and perimeter-elasticity model based on the physical features of cells and the junctions between them. In this thesis, we modify the surface energy term so as to allow the exchange of matter between neighboring cells. The thus generalized model supplemented with dynamic processes such as cell division, death, and T1 topological transitions, is numerically analyzed in the vertex representation. We compare the results with experimental data and existing models, and we verify the validity of the Lewis law and the Aboav-Weaire law. We use the area-to-perimeter ratio to describe the isometricity of cells in the tilings. We study the topological properties and the dynamics of epithelial tilings across the state diagram.

Keywords:epithelial tissue, cell, random tiling, polygon class, cell division, cell death, topological transition

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