New quinolinone O-GlcNAc transferase inhibitors based on fragment growth

Weiss, Matjaž (author), Loi, Elena Maria (author), Sterle, Maša (author), Balsollier, Cyril (author), Tomašič, Tihomir (author), Pieters, Roland J. (author), Gobec, Martina (author), Anderluh, Marko (author)

O-GlcNAcylation is an important posttranslational and metabolic process in cells that must be carefully regulated. O-GlcNAc transferase (OGT) is ubiquitously present in cells and is the only enzyme that catalyzes the transfer of O-GlcNAc to proteins. OGT is a promising target in various pathologies such as cancer, immune system diseases, or nervous impairment. In our previous, work we identified the 2-oxo-1,2-dihydroquinoline-4-carboxamide derivatives as promising compounds by a fragment-based drug design approach. Herein, we report the extension of this first series with several new fragments. As the most potent fragment, we identified 3b with an IC50 value of 116.0 [micro]M. If compared with the most potent inhibitor of the first series, F20 (IC50 = 117.6 [micro]M), we can conclude that the new fragments did not improve OGT inhibition remarkably. Therefore, F20 was used as the basis for the design of a series of compounds with the elongation towards the O-GlcNAc binding pocket as the free carboxylate allows easy conjugation. Compound 6b with an IC50 value of 144.5 [micro]M showed the most potent OGT inhibition among the elongated compounds, but it loses inhibition potency when compared to the UDP mimetic F20. We therefore assume that the binding of the compounds in the O-GlcNAc binding pocket is likely not crucial for OGT inhibition. Furthermore, evaluation of the compounds with two different assays revealed that some inhibitors most likely interfere with the commercially available UDP-Glo glycosyltransferase assay, leading to false positive results. This observation calls for caution, when evaluating UDP mimetic as OGT inhibitors with the UDP-Glo glycosyltransferase assay, as misinterpretations can occur.

• Language: English
• Keywords: O-GlcNAc, O-GlcNAc transferase, protein glycosylation, fragments growth, molecular docking
• Work type: Article
• Typology: 1.01 - Original Scientific Article
• Organization: FFA - Faculty of Pharmacy
• Publication status: Published
• Publication version: Version of Record
• Year: 2021
• Number of pages: Str. 1-8
• Numbering: Vol. 9
• PID: 20.500.12556/RUL-141879
• UDC: 615.4:54:616-097
• ISSN on article: 2296-2646
• DOI: 10.3389/fchem.2021.666122
• COBISS.SI-ID: 55702275
• Publication date in RUL: 10.10.2022

Record is a part of a journal

• Title: Frontiers in chemistry
• Shortened title: Front. chem.
• Publisher: Frontiers Editorial Office
• ISSN: 2296-2646
• COBISS.SI-ID: 1647919

Secondary language

• Language: Slovenian
• Keywords: glikozirani proteini, fragmentna rast, molekularno sidranje, O-GlcNAc transferaza

Projects

• Funder: ARRS - Slovenian Research Agency
• Project number: P1-0208
• Name: Farmacevtska kemija: načrtovanje, sinteza in vrednotenje učinkovin

• Funder: EC - European Commission
• Funding programme: H2020
• Project number: 765581
• Name: Multidisciplinary European Joint Doctorate in the Design and Development of Glyco Drugs
• Acronym: PhD4GlycoDrug