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Overjanje in primerjava kvalitativnih seroloških metod za določanje protiteles IgM in IgG proti virusu SARS-CoV-2
ID Štebih, Maša (Author), ID Jerin, Aleš (Mentor) More about this mentor... This link opens in a new window, ID Skitek, Milan (Co-mentor)

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Abstract
Epidemija koronavirusa SARS-CoV-2, je sprožila velik razvoj molekularnih metod, ki identificirajo aktivno okužbo preko detekcije virusne RNA in seroloških metod, ki zaznajo specifična protitelesa, največkrat IgG in IgM usmerjene, najpogosteje proti virusnemu koničastemu ali nukleokapsidnemu proteinu. Ob poznavanju kinetike imunskega odziva na okužbo z virusom SARS-CoV-2 lahko serološke metode uporabljamo kot dopolnilo molekularnim metodam, pri opredelitvi seroprevalence, poznavanju virusa ter razvoju potencialnih cepiv. Kljub potrebi po hitri implementaciji metod v rutino je pred uporabo potreben korak overjanja, s katerim ocenimo diagnostične in analitične lastnosti metod. Na podlagi rezultatov ugotovimo ali metoda v laboratoriju daje kakovostne in zanesljive rezultate ter služi svojemu namenu. Z namenom čim hitrejše uporabe smo overili in primerjali tri kvalitativne serološke metode, ki v serumu določajo protitelesa proti nukleokapsidnemu proteinu virusa SARS-CoV-2. Izbrali smo dve avtomatizirani metodi, Roche Elecsys Anti-SARS-CoV-2 in Abbott SARS-CoV-2 IgG in test ob pacientu (POCT) SARS-CoV-2 IgM/IgG Antibody Assay Kit by Colloidal Gold Method. S primerjavo z metodo RT-PCR smo na 91 RT-PCR negativnih in 60 RT-PCR pozitivnih vzorcih ocenili diagnostične lastnosti metod. Ugotovili smo, da ima najslabše diagnostične lastnosti test ob pacientu, saj poda največ lažnih rezultatov (8,61 %). Najmanj lažnih rezultatov (2,65 %) je podala metoda Roche Elecsys Anti-SARS-CoV-2 z najboljšo diagnostično občutljivostjo 98,33 % (91,06–99,96). Sklepali smo, da metoda daje tako dobre rezultate zaradi avtomatizirane detekcije obeh razredov protiteles. Med metodami smo s Cohenovim koeficientom kappa (к) določili stopnjo ujemanja. Skoraj popolno ujemanje smo dokazali med avtomatiziranima metodama, z vrednostjo к = 0,90 (0,83–0,97). Avtomatiziranima metodama smo ocenili ponovljivost, vmesno natančnost in znotraj laboratorijsko natančnost. Ugotovili smo, da obe metodi dosegata kriterije proizvajalca. Zaključimo lahko, da avtomatizirani metodi dajeta boljše rezultate od testa ob pacientu, predvsem metoda, ki določa oba razreda protiteles, prav tako pa je njuno ujemanje med rezultati boljše od ujemanja s testom ob pacientu. Poleg boljših diagnostičnih lastnosti obe avtomatizirani metodi v smislu natančnosti dosegata kriterije proizvajalca, zaradi česar lahko sklepamo, da rezultatom lahko zaupamo in jih ustrezno interpretiramo.

Language:Slovenian
Keywords:virus SARS-CoV-2, okužba covid-19, serološke metode, overjanje, protitelesa
Work type:Master's thesis/paper
Organization:FFA - Faculty of Pharmacy
Year:2021
PID:20.500.12556/RUL-133125 This link opens in a new window
Publication date in RUL:12.11.2021
Views:806
Downloads:185
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Secondary language

Language:English
Title:Verification and comparison of qualitative serological assays for anti-SARS-CoV-2 IgM and IgG antibodies detection
Abstract:
The SARS-CoV-2 coronavirus epidemic has triggered a major development of molecular methods that identify active infection through viral RNA detection and serological methods that detect specific antibodies, usually IgG and IgM directed, most commonly against viral spike or nucleocapsid protein. With knowledge of the kinetics of the immune response to SARS-CoV-2 virus infection, serological methods can be used as an appendix to molecular methods, in determining seroprevalence, in knowledge of the virus, and the development of potential vaccines. Despite the need for rapid implementation of methods into routine practice, a verification step is required before the use, in order to evaluate the diagnostic and analytical properties. Based on the results, we can determine whether the method in the laboratory gives quality and reliable results and fits its purpose. In order to use it as quickly as possible, we verified and compared three qualitative serological assays that determine antibodies against SARS-CoV-2 nucleocapsid protein in the serum. We selected two automated methods, the Roche Elecsys Anti-SARS-CoV-2 and Abbott SARS-CoV-2 IgG and the point of care test SARS-CoV-2 IgM / IgG Antibody Assay Kit by Colloidal Gold Method. By comparison with the RT-PCR method, the diagnostic properties of the assays were evaluated on 91 RT-PCR negative and 60 RT-PCR positive samples. We found that the point-of-care test has poorer diagnostic characteristics, as it gives the most false results (8,61 %). The least false positive results (2,65 %) were given by the Roche Elecsys Anti-SARS-CoV-2 assay with the best diagnostic sensitivity of 98,33 % (91,06–99,96). We concluded that the method gives such good results due to the automated detection of both classes of antibodies. Among the methods, we determined the level of agreement using the Cohen's kappa coefficient (к). An almost perfect agreement with к = 0,90 (0,83–0,97) was proven between the automated assays. Repeatability, intermediate and interlaboratory precision were assessed to automated methods. We found that both meet the manufacturer’s criteria. We can conclude that automated methods give better results than the point-of-care test, especially the one that determines both classes of antibodies. Their agreement between the results is also better than agreement between the results gained by the point-of-care test. In addition to better diagnostic properties, both automated methods meet the manufacturer's criteria in terms of accuracy, which means that the results can be trusted and interpreted correctly.

Keywords:SARS-CoV-2 virus, COVID-19 infection, serological methods, verification, antibodies

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