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Pomen horizontalnega prenosa genov iz gostiteljskih v parazitske rastline
ID Pratljačić, Toni (Author), ID Berne, Sabina (Mentor) More about this mentor... This link opens in a new window

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Abstract
Z naraščanjem števila prebivalcev se iz leta v leto povečujejo potrebe po hrani, kmetijske površine pa ostajajo enake oziroma se še zmanjšujejo, zato je pomembno, da se na čim manjši površini pridela čim več pridelka. Pri majhnem izkoristku so poglavitna težava predvsem škodljivci, kot so insekti, virusi in bakterije. Vedno bolj pa se kaže tudi vpliv parazitskih rastlin, ki se preko posebne strukture imenovane havstorij povežejo z gostiteljsko rastlino ter iz nje črpajo hranila in vodo, s čimer oslabijo njeno rast in produktivnost. Razen tolerance rastlin zaenkrat še nimamo splošne metode za zatiranje parazitskih rastlin, je pa za njen razvoj ključno razumevanje fiziologije, interakcije z gostiteljem in evolucije parazitskih rastlin. Največja težava pri zatiranju je dolga dormanca semen, saj lahko v zemlji ostanejo tudi nekaj desetletij. Ob prisotnosti kalitvenega stimulansa, določene spojine proizvedene v gostitelju, vzklijejo ter ob zaznavi primernega gostitelja s pomočjo tako imenovanih havstorij inducirajočih faktorjev (HIF, ang. haustorium inducing factors) oblikujejo havstorije. Skoznje se ne prenašajo le hranila in voda, temveč se lahko aktivno prenašajo tudi genetski zapisi, bodisi RNK ali DNK. Tekom evolucije so se določeni genetski zapisi vgradili v genom parazitskih rastlin in s tem povečali njihovo sposobnost preživetja ali izboljšali parazitske lastnosti. Ti tako imenovani horizontalno preneseni geni (HGT) so večinoma utišani, nekateri pa se močno izražajo v parazitskih rastlinah in omogočajo ključne funkcije kot so metabolizem, celično dihanje, translacija mRNA v mitohondrijih in pretvorba proteinov. Nekaj genov HGT povezujejo tudi z zaviranjem obrambe gostitelja.

Language:Slovenian
Keywords:parazitske rastline, kmetijski škodljivci, evolucija, horizontalni prenos genov, obrambni mehanizmi, genetika
Work type:Bachelor thesis/paper
Typology:2.11 - Undergraduate Thesis
Organization:BF - Biotechnical Faculty
Place of publishing:Ljubljana
Publisher:[T. Pratljačić]
Year:2021
PID:20.500.12556/RUL-128453 This link opens in a new window
UDC:576.88:581.137.3(043.2)
COBISS.SI-ID:70032643 This link opens in a new window
Publication date in RUL:14.07.2021
Views:1472
Downloads:75
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Secondary language

Language:English
Title:Understanding the horizontal gene transfer from host to parasitic plants
Abstract:
The demand for food is increasing with growing world population, while agricultural land is becoming scarcer, therefore it is important to increase the yield of crop plants on the existing land. Primary reason for crop yield losses are pests, such as insects, viruses and bacteria, however parasitic plants are also becoming an increasing problem. Parasitic plants form a specific structure called haustorium, through which they draw nutrients and water from their hosts, impacting host growth and productivity. Apart from host tolerance, there is no general method for controlling parasitic plants, but understanding the physiology, host interactions and evolution of parasitic plants is crucial for its development. The biggest problem with parasitic plants control is the long dormancy of the seeds, because they can survive in the soil for up to a few decades. In the presence of a germination stimulant, a certain compound produced by host plant, they germinate, and when suitable host is detected through a haustorium inducing factor (HIF), they form a haustorium. Nutrients and water are transferred through the haustorium, but in some cases genetic material, RNA or DNA, is actively transferred as well. Over the course of evolution, certain genes have been incorporated in the genomes of parasitic plants, thereby increasing their viability or improving parasitic traits. Most of these so-called horizontally transferred genes (HGT genes) are silent, but some of them have been recognized as highly expressed in the parasite plants, participating in key functions like metabolism, cell respiration, mitochondrial translation and conversion of proteins. Certain HGT genes are also associated with suppression of the host defence mechanisms.

Keywords:parasitic plants, agricultural pests, evolution, horizontal gene transfer, defense mehanisms, genetics

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