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Pojavljanje kvasovke Cryptococcus neoformans sensu lato na različnih drevesnih vrstah in v tleh
ID Božič, Nika (Author), ID Matos, Tadeja (Mentor) More about this mentor... This link opens in a new window

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Abstract
Cryptococcus neoformans sensu lato so glive kvasovke, ki se nahajajo v okolju in lahko povzročajo okužbe pri ljudeh. V zadnjih letih se kot njihova ekološka niša omenjajo različne drevesne vrste po vsem svetu. Njihov obstoj v okolju je pogojen s količino padavin in s temperaturo. V sredozemskem okolju tako zasledimo predvsem vrsto C. neoformans, medtem ko zmerno celinsko podnebje ugaja vrsti C. deneofromans. Namen naloge je bil odkriti in opisati prisotnost Cryptococcus neoformans sensu lato na različnih drevesnih vrstah v Sloveniji. Vzorčenje je potekalo v petindvajsetih krajih v šestih različnih regijah, s čimer smo pokrili celotno površino Slovenije. Skupaj smo zbrali tristo dvaintrideset vzorcev iz različnih drevesnih vrst in vinskih trt. Vzorčili smo liste, plodove, prst v bližini drevesa, ptičje iztrebke na deblu dreves, lubje, razpoke med skorjo in votle dele v deblu. Pridobljene vzorce smo gojili na agarju z izvlečkom semen abesinske gizotije. Kremasto ali rjavo obarvane kolonije, sumljive za kriptokoke, smo izolirali in identificirali z MALDI TOF. Skupno smo pridobili štiri izolate C. neoformans sensu stricto, ki smo jih osamili iz pinij (Pinus pinea) ter oljke (Olea europea). Vsi štirje izolati iz dreves so bili pridobljeni z brisanjem razpok med skorjo in iz votlih delov debel, poleg tega so bili vsi dobljeni v Obalno-kraški regiji. Z metodo mikrodilucije smo za vse pridobljene izolate testirali občutljivost za antimikotike. Izolati so pokazali največjo občutljivost za itrakonazol ter posakonazol.

Language:Slovenian
Keywords:glive, kvasovke, C. neoformans, C. neoformans sensu stricto, ekološke niše, drevesne vrste, pinija, oljka, identifikacija, MALDI TOF
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Publisher:[N. Božič]
Year:2019
PID:20.500.12556/RUL-113340 This link opens in a new window
UDC:579.26:582.282.23:543.51
COBISS.SI-ID:5138040 This link opens in a new window
Publication date in RUL:21.12.2019
Views:2141
Downloads:319
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Secondary language

Language:English
Title:Cryptococcus neoformans sensu lato on different tree species and in soil samples
Abstract:
Cryptococcus neoformans sensu lato are basidiomycetous yeast that are found in the environment and can cause infections in humans. In recent years, various tree species around the world have been described as their ecological niche. Their presence in the environment is conditioned with the amount of preciptation and temperature. In the Mediterranean the prevalent species is C. neoformans sensu stricto, while C. deneoformans prefers continental climate. The aim of our study was to determine the presence of Cryptococcus neoformans sensu lato on various tree species in Slovenia. Sampeling was performed in six different statistical regions in the country, covering the whole area of Slovenia. Three hundred thirty-two samples from trees and grapevine were collected. The source of samples were leaves, fruits, soil under the trees, bird excreta on trunk, bark, fissures and inner trunk hollows. Samples were cultured on niger seed agar medium. Brownish or creamy colonies, resembling for Cryptococcus spp. were identified with MALDI TOF MS. All four recovered isolates were identified as C. neoformans sensu stricto, obtained from Italian stone pine (Pinus pinea) and olive tree (Olea europea). In addition, all isolates were recovered from fissure and inner trunk hollow swabs in the Costal-Karst statistical region. The antifungal susceptibility testing was performed by broth microdilution method for all cryptococcal isolates. According to antifungal susceptibility testing results, the isolates are most susceptible to itraconazole and posaconazole.

Keywords:fungi, yeasts, C. neoformans, C. neoformans sensu stricto, ecological niche, tree species, stone pine, olive tree, identification, MALDI TOF

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