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Občutljivost slovenskih izolatov enterobakterij za kolistin
ID Teržan, Tjaša (Author), ID Seme, Katja (Mentor) More about this mentor... This link opens in a new window, ID Pirš, Mateja (Comentor)

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Abstract
Zaradi pomanjkanja razvoja novih antibiotikov in naraščanja števila okužb z večkratno odpornimi, po Gramu negativnimi bakterijami, se v rabo ponovno vračajo starejši antibiotiki. Eden izmed takšnih je kolistin, ki so ga v humani medicini uporabljali že leta 1958, a so njegovo rabo omejili zaradi njegove nefrotoksičnosti in nevrotoksičnosti. Do pred kratkim so bili edini poznani mehanizmi odpornosti proti kolistinu posledica kromosomskih mutacij, ki pa niso predstavljali velike nevarnosti za hitro širjenje med bakterijskimi vrstami. Prvič so o plazmidno posredovani odpornosti za kolistin poročali novembra 2015 iz Kitajske. Pri prašičjem izolatu Escherichia coli so odkrili gen mcr-1, ki kodira encim fosfoetanolamin transferazo. Od odkritja, pa do danes, so tako poročali o prisotnosti gena pri vrstah E. coli, Salmonella spp., in Klebsiella pneumoniae po celem svetu. V raziskavi smo želeli ugotoviti, kakšna je občutljivost slovenskih izolatov enterobakterij za kolistin in ali je v Sloveniji prisotna plazmidno kodirana odpornost proti kolistinu. Z mikrodilucijsko metodo smo testirali občutljivost 409 enterobakterij za kolistin. Med testiranimi izolati bakterijskih vrst enterobakterij, je bilo 392 (95,8 %) izolatov občutljivih in 17 (4,2 %) izolatov odpornih proti kolistinu. Kolistin je bil in vitro dobro učinkovit proti izolatom enterobakterij (MIK90 = 0,5-1 g/ml). 6 (10,7 %) izolatov rodu Enterobacter, 7 (6,8 %) izolatov vrste K. pneumoniae, 1 (3,3 %) izolat rodu Citrobacter in 3 (1,4 %) izolati vrste E. coli, so bili odporni proti kolistinu. Pri odpornih izolatih, smo z metodo verižne reakcije s polimerazo preverjali prisotnost gena mcr-1. Pri enem izolatu E. coli iz vzorca urina smo našli plazmidno kodirano odpornost proti kolistinu.

Language:Slovenian
Keywords:enterobakterije, kolistin, občutljivost za kolistin, Escherichia coli, Klebsiella pneumoniae spp. pneumoniae, Enterobacter spp., Citrobacter spp., gen mcr-1, mikrodilucijska metoda, verižna reakcija s polimerazo
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:BF - Biotechnical Faculty
Publisher:[T. Teržan]
Year:2018
PID:20.500.12556/RUL-101797 This link opens in a new window
UDC:579.24/.26:579.842.1/.2:615.33
COBISS.SI-ID:4926584 This link opens in a new window
Publication date in RUL:06.07.2018
Views:3270
Downloads:540
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Secondary language

Language:English
Title:Susceptibility of Slovenian Enterobacteriaceae isolates to colistin
Abstract:
The insufficient development of new antibiotics and the growing incidence of infections with multi-resistant Gram-negative bacteria have led to older antibiotics returning into use. One of them is colistin, used in human medicine since 1958, although its use has been limited due to its nephrotoxicity and neurotoxicity. Until recently, the only known resistance mechanisms against colistin were the consequence of chromosomal mutations, which, however, did not present a great risk for rapid spread among bacteria species. A plasmid-mediated resistance to colistin was first reported in November 2015 in China. An mcr-1 gene that encodes the phosphoethanolamine transferase enzyme was discovered in an Escherichia coli pig isolate. Since its discovery the presence of the gene in E. coli, Salmonella spp. and K pneumoniae species has been reported from all over the world. The research attempted to discover the susceptibility of the Slovene isolates of Enterobacteriaceae for colistin, and whether the plasmid-coded resistance against colistin is present in Slovenia. A micro-dilution method was used to test 409 Enterobacteriaceae. Between the tested isolates of Enterobacteriaceae bacteria species, 392 (95.8 %) isolates were susceptible and 17 (4.2 %) isolates were resistant against colistin. In vitro, colistin performed well against Enterobacteriaceae isolates (MIC90 = 0.5-1 g/ml). Six (10.7 %) isolates of the genus Enterobacter, seven (6.8 %) isolates of the species K. pneumoniae, one (3.3 %) isolate of the genus Citrobacter and three (1.4 %) isolates of the species E. coli, were colistin-resistant. In resistant isolates, the polymerase chain reaction was used to check the presence of mcr-1 gene. In one E. coli isolate from a urine sample, the plasmid-coded resistance against colistin was detected.

Keywords:Enterobacteriaceae, colistin, antimicrobial susceptibility to colistin, Escherichia coli, Klebsiella pneumoniae spp. pneumoniae, Enterobacter spp., Citrobacter spp. mcr-1 gene, microdilution method, PCR

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