1. Initial state perturbations as a validation method for data-driven fuzzy models of cellular networks
Lidija Magdevska, Miha Mraz, Nikolaj Zimic, Miha Moškon, 2018, original scientific article

Keywords: fuzzy logic, modelling and simulation, data-driven modelling, cellular networks, computational biology, model validation, dynamic modelling, MAPK signalling pathway, circadian clock
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3. Vitamin A and retinoids in bladder cancer chemoprevention and treatment
Larisa Tratnjek, Jera Jeruc, Rok Romih, Daša Zupančič, 2021, review article

Keywords: bladder cancer, vitamin A, retinoic acid signalling, retinoids, chemoprevention, treatment, experimental bladder cancer models, clinical trials, delivery systems, novel targets
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5. Ca$^{2+}$ as the prime trigger of aerobic glycolysis in astrocytes
Anemari Horvat, Marko Muhič, Tina Smolič, Ena Begić, Robert Zorec, Marko Kreft, Nina Vardjan, 2021, original scientific article

Keywords: astrocytes, aerobic glycolysis, D-glucose, L-lactate, Ca$^{2+}$/cAMP signalling
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7. Structural basis of calcineurin inhibition by FATZ-1
Dunia Sahir, 2023, master's thesis

Keywords: Muscle fiber remodelling, sarcomere, Z-disk, calcineurin-NFAT signalling pathway, FATZ-1 inhibition, α-actinin-3 deficiency
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9. Designed allosteric protein logic
Tjaša Plaper, Estera Merljak, Tina Fink, Tadej Satler, Ajasja Ljubetič, Duško Lainšček, Vid Jazbec, Mojca Benčina, Sintija Stevanoska, Sašo Džeroski, Roman Jerala, 2024, original scientific article

Keywords: cell signalling, protein folding
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