1. Purification, cloning and characterization of fragaceatoxin C, a novel actinoporin from the sea anemone Actinia fragaceaAugusto Bellomio, Koldo Morante, Ariana Barlič, Ion Gutiérrez-Aguirre, Ana Rosa Viguera, Juan Manuel González-Mañas, 2009, original scientific article Keywords: fragaceatoxin C, actinoporins, lipid-protein interactions
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2. Interaction between oligomers of stefin B and amyloid-beta in vitro and in cellsKatja Škerget, Ajda Taler-Verčič, Andrej Bavdek, Vesna Hodnik, Slavko Čeru, Magda Tušek-Žnidarič, Maruša Pompe Novak, Nataša Kopitar-Jerala, Vito Turk, Gregor Anderluh, Eva Žerovnik, 2010, original scientific article Keywords: neurodegeneration, Alzheimer's disease, mass spectrometry, surface plasmon resonance, protein folding, protein-protein interactions, amyloid
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3. Interparticle interactions in aqueous solutions of globular proteinsSandi Brudar, 2020, doctoral dissertation Keywords: lysozyme, globular proteins, protein-protein interactions, cloud point temperature, phase stability, amyloid fibrils, buffer-specific effects, molecular dynamics, expression of proteins
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4. Molecular insights into the oxygen-sensing pathway and erythropoietin expression regulation in erythropoiesisJana Tomc, Nataša Debeljak, 2021, review article Keywords: erythropoiesis, erythropoietin, molecular mechanisms, oxygen-sensing pathway, hypoxia-inducible factor, post-translational modifications, protein interactions, nuclear transport, transcriptional regulation
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5. Conditional cooperativity in DNA minor-groove recognition by oligopeptidesJurij Lah, San Hadži, 2021, original scientific article Keywords: DNA recognition, conditional cooperativity, transcription regulation, protein–DNA interactions, ligand–DNA interactions, distamycin, netropsin, thermodynamics of binding, phase diagrams, DNA folding
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6. Biomolecular complexation on the “wrong side”Matjaž Simončič, Jozef Hritz, Miha Lukšič, 2022, original scientific article Keywords: protein-polyelectrolyte complexation, sucrose, sucralose, electrostatic interactions, salt-specific effects, carbohydrates, complexation, ionic strength, salts, titration
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7. A method for construction and optimization of lipid nanodisks for molecular dynamics simulationsBor Ivanuš, 2024, master's thesis/paper Keywords: nanodisks, mimetic peptides, molecular dynamics simulations, all atom, coarse-grain, lipid bilayer, Lipid-protein interactions, apolipoproteins
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