11. Genomic insights into the emergence and spread of methicillin-resistant Staphylococcus pseudintermedius in veterinary clinicsBojan Papić, Majda Golob, Irena Zdovc, Darja Kušar, Jana Avberšek, 2021, original scientific article Keywords: antimicrobial susceptibility testing, epidemiology, methicillin-resistant Staphylococcus pseudintermedius (MRSP), small animal clinic, whole-genome sequencing (WGS) Full text (file, 2,86 MB) This document has more files! More... |
12. Beer spoiling mechanisms of Lactobacillus brevisMateja Govže, 2017, master's thesis Keywords: beer, hop, Humulus lupulus, beer spoilage, lactic acid bacteria, Lactobacillus brevis, genome, genome sequencing, genome analysis, RNA sequencing, transcriptomic analysis, gene expression analysis, fenotypic analysis Full text (file, 5,50 MB) |
13. Staphylococcus pseudintermedius septicemia in puppies after elective cesarean sectionMaja Zakošek, Tanja Švara, Irena Zdovc, Bojan Papić, Jana Avberšek, Darja Kušar, Janko Mrkun, 2019, original scientific article Keywords: staphylococcal infections, whole genome sequencing, milk, dogs Full text (file, 1,24 MB) |
|
15. Source tracking on a dairy farm reveals a high occurrence of subclinical mastitis due to hypervirulent Listeria monocytogenes clonal complexesBojan Papić, Majda Golob, Darja Kušar, Mateja Pate, Irena Zdovc, 2019, original scientific article Keywords: Listeria monocytogenes, food safety, whole‐genome sequencing, pulsed‐field gel electrophoresis, virulence, cattle Full text (file, 160,93 KB) This document has more files! More... |
16. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, original scientific article Keywords: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats Full text (file, 537,70 KB) This document has more files! More... |
17. Nearly complete genome sequences of two bovine viral diarrhea virus isolates, subtype 1f strain SLO/1170/2000 and subtype 1d strain SLO/2416/2002Ivan Toplak, Danijela Černe, Jože Grom, Nataša Toplak, Urška Kuhar, 2019, short scientific article Keywords: Diarrhea virus 1, bovine viral – Genetics – Isolation and purification, Genome viral, Cattle Full text (file, 107,90 KB) |
18. Stress reshapes the physiological response of halophile fungi to salinityYordanis Pérez-Llano, Eya Caridad Rodríguez-Pupo, Irina S. Druzhinina, Komal Chenthamara, Feng Cai, Nina Gunde-Cimerman, Polona Zalar, Cene Gostinčar, Rok Kostanjšek, Jorge Luis Folch-Mallol, Ramón Alberto Batista-García, María del Rayo Sánchez-Carbente, 2020, original scientific article Keywords: Aspergillus sydowii, genome, fungal cell wall, compatible solutes, halophilic fungi, hydrophobins, fungal transcriptomics, osmotic stress Full text (file, 3,82 MB) This document has more files! More... |
19. Antimicrobial and modulatory activity of selected phytochemicals and epidemiological characteristics of antibiotic resistance in Camylobacter jejuniJasna Kovač, 2015, doctoral dissertation Keywords: Campylobacter jejuni, foodborne pathogens, antibiotic resistance, resistance modulation, plant extracts, pinocembrin, Alpinia katsumadai, essential oils, phytochemicals, alpha pinene, efflux inhibitors, adaptation response, epidemiology, MLST, gyr A typing, whole genome sequences, clonal expansion, campylobacteriosis prevalence, mathematical modelling Full text (file, 28,15 MB) |
20. Comparison of selected methods in bacteriological diagnostics and their use in bacterial typingKatarina Benulič, 2020, doctoral dissertation Keywords: 16S rDNA PCR, real-time PCR, bacteria, syndromic testing, cultivation, ventilator-associated pneumonia, meningitis, arthritis, Klebsiella pneumoniae, whole-genome sequencing, WGS, NGS, resistance, carbapenemase, OXA-48, NDM, outbreak Full text (file, 3,55 MB) |