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1. iTRAQ based proteomic profiling reveals increased metabolic activity and cellular crosstalk in angiogenic compared to invasive glioblastoma phenotype
Uroš Rajčević, 2009, original scientific article

Keywords: iTRAQ, MALDI TOF/TOF, glioma, xenograft, tumor host interaction, cancer biomarker, invasion (biology), angiogenesis, bioinformatics
Full text (outside link)

2. The evolution of fatty acid desaturases and cytochrome b5 in eukaryotes
Cene Gostinčar, Martina Turk, Nina Gunde-Cimerman, 2010, original scientific article

Keywords: fatty acid, desaturase, evolution, cytochrome b5, polyunsaturated fatty acid, eukaryote, fungus, bioinformatics
Full text (outside link)

3. Scalable matrix factorization for data fusion
Andrej Čopar, 2019, doctoral dissertation

Keywords: Machine learning, bioinformatics, matrix factorization, data fusion
Full text (file, 4,53 MB)

4. Genome representation and comparison using embeddings
Tilen Kopač, 2021, master's thesis

Keywords: bioinformatics, autoencoder, embedding
Full text (file, 4,28 MB)

5. Unconventional secretion of nigerolysins A from Aspergillus species
Nada Kraševec, Maruša Novak, Simona Barat, Matej Skočaj, Kristina Sepčić, Gregor Anderluh, 2020, original scientific article

Keywords: aegerolysin, nigerolysin, membrane-attack-complex/perforin (MACPF) protein, Aspergillus, Fungi, bioinformatics, localization, unconventional secretion, ceramide phosphoethanolamine (CPE), invertebrate lipid binding
Full text (file, 5,19 MB) This document has more files! More...

6. Expression of cytokine-coding genes BMP8B, LEFTY1 and INSL5 could distinguish between ulcerative colitis and Crohn's disease
Daša Jevšinek Skok, Nina Hauptman, Miha Jerala, Nina Zidar, 2021, original scientific article

Keywords: inflammatory bowel disease, ulcerative colitis, Crohn's disease, inflammatory cytokines, expression, bioinformatics approach, experimental validation
Full text (file, 2,54 MB) This document has more files! More...

7. Lipid-binding aegerolysin from biocontrol fungus Beauveria bassiana
Nada Kraševec, Anastasija Panevska, Špela Lemež, Jaka Razinger, Kristina Sepčić, Gregor Anderluh, Marjetka Podobnik, 2021, original scientific article

Keywords: beauveriolysin, membrane-attack-complex/perforin (MACPF) protein, pore-forming proteins, entomopathogenic and antagonistic fungi, bioinformatics, ceramide phosphoethanolamine (CPE), lipid binding
Full text (file, 1,86 MB) This document has more files! More...

8. Bioinformatics integration of microbiome and metabolomics data in the translational context
Leon Deutsch, 2022, doctoral dissertation

Keywords: bioinformatics, metabolomics, metagenomcis, physical inactivity, data integration, systems biology, microbiome, urine, nuclear magnetic spectrometry
Full text (file, 30,37 MB)

9. Variation in chloroplast genome size
Ante Turudić, Zlatko Liber, Martina Grdiša, Jernej Jakše, Filip Varga, Zlatko Šatović, 2023, original scientific article

Keywords: genome database, chloroplast genome, sequence length, taxonomy, bioinformatics
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