1. ERIC and WGS typing of Paenibacillus larvae in SloveniaAlenka Žugelj, Bojan Papić, Irena Zdovc, Urška Zajc, Majda Golob, Jana Avberšek, Darja Kušar, 2021, original scientific article Keywords: Paenibacillus larvae, American foulbrood (AFB), ERIC-PCR, whole-genome sequencing (WGS), transmission, outbreak investigation, molecular sequence data, genotype Full text (file, 3,50 MB) This document has more files! More... |
2. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, original scientific article Keywords: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats Full text (file, 537,70 KB) This document has more files! More... |
3. Comparison of selected methods in bacteriological diagnostics and their use in bacterial typingKatarina Benulič, 2020, doctoral dissertation Keywords: 16S rDNA PCR, real-time PCR, bacteria, syndromic testing, cultivation, ventilator-associated pneumonia, meningitis, arthritis, Klebsiella pneumoniae, whole-genome sequencing, WGS, NGS, resistance, carbapenemase, OXA-48, NDM, outbreak Full text (file, 3,55 MB) |
4. Genomic insights into Salmonella Choleraesuis var. Kunzendorf outbreak reveal possible interspecies transmissionBojan Papić, Darja Kušar, Jasna Mićunović, Špela Vidrih, Mateja Pirš, Matjaž Ocepek, Jana Avberšek, 2021, original scientific article Keywords: Salmonella Choleraesuis, whole-genome sequencing, domestic pig, wild boar, outbreak investigation Full text (file, 855,26 KB) This document has more files! More... |
5. Using whole-genome sequencing to assess the diversity of Paenibacillus larvae within an outbreak and a beekeeping operationBojan Papić, Majda Golob, Irena Zdovc, Jana Avberšek, Metka Pislak, Darja Kušar, 2021, original scientific article Keywords: Paenibacillus larvae, American foulbrood, AFB, whole-genome sequencing, WGS, whole-genome multilocus sequence typing, wgMLST, outbreak, beekeeping operation, molecular sequence data, genotype Full text (file, 1,11 MB) This document has more files! More... |