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1. The integrative knowledge base for miRNA-mRNA expression in colorectal cancer
Daša Jevšinek Skok, Nina Hauptman, Emanuela Boštjančič, Nina Zidar, 2019, original scientific article

Keywords: web aplication, RNA expression, colorectal cancer, gene expression, knowledge base, cancer genome atlas, miRNA, mRNA, gene correlation, target genes
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2. Gene expression levels of the prolyl hydroxylase domain proteins PHD1 and PHD2 but not PHD3 are decreased in primary tumours and correlate with poor prognosis of patients with surgically resected non-small-cell lung cancer
Ana Koren, Matija Rijavec, Tomaž Krumpestar, Izidor Kern, Aleksander Sadikov, Tanja Čufer, Peter Korošec, 2021, original scientific article

Keywords: non-small-cell lung cancer, mRNA expression, prolyl hydroxylase domain proteins, carcinoma, prognosis
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3. Immunocastration in adult boars as a model for late-onset hypogonadism
Nina Batorek Lukač, Kevin Kress, Marjeta Čandek-Potokar, Gregor Fazarinc, Martin Škrlep, Klavdija Poklukar Žnidaršič, Raffael Wesoly, Volker Stefanski, Milka Vrecl, 2022, original scientific article

Keywords: response to immunocastration, pigs, anti-GnRH, morphometry, testicular mRNA expression
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4. Deep learning of tissue-specific gene expression from DNA sequences
Uroš Polanc, 2023, master's thesis

Keywords: bioinformatics, convolutional neural network, DNA, DNABERT, gene expression, machine learning, sequence motifs, mRNA, predictive models, regulatory mechanisms, tissue-specific gene expression, tissue-specificity
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5. The prognostic and predictive value of human gastrointestinal microbiome and exosomal mRNA expression of PD-L1 and IFNγ for immune checkpoint inhibitors response in metastatic melanoma patients
Ana Erman, Marija Ignjatović, Katja Leskovšek, Simona Miceska, Urša Lampreht Tratar, Maša Omerzel, Veronika Kloboves-Prevodnik, Maja Čemažar, Lidija Kandolf Sekulović, Gorazd Avguštin, Janja Ocvirk, Tanja Mesti, 2023, original scientific article

Keywords: gastrointestinal microbiome, mRNA expression of PD-L1 and IFNγ, immune checkpoint inhibitors, metastatic melanoma, predictive and prognostic biomarkers, immune-related adverse events
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