1. Impact of type of parturition on colostrum microbiota composition and puppy survivalLeonida Kajdič, Tanja Plavec, Irena Zdovc, Anja Kalin, Maja Zakošek, 2021, original scientific article Keywords: neonatology, birth, puppies, microbiota, parturition, physiology, animals, newborn, microbiology, dogs
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2. The outcomes of metabolic, molecular and physical-chemical characterization of intestinal tract microbiome on a four mammalian species modelNataša Ciber, Mateja Dolenc, Benjamin Drakslar, Andreja Gazvoda, Nika Klinec, Bojan Papić, Anja Pugelj, Katarina Šimunović, Tamara Zoran, Tina Zupančič, Blaž Stres, 2014, original scientific article Keywords: microbiology, mammals, intestinal tract, microbiota, metabolic profiling, student work, quality
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3. Physical inactivity related changes in human fecal microbiotaRobert Šket, 2018, doctoral dissertation Keywords: human intestinal microbiota, microbial communities, Bacteroides, hypoxia, inactivity inflammation, constipation, gut metabolites
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4. Use of the black soldier fly (Hermetia illucens) for protein production from organic wastes and its microbiomeTajda Bogataj, 2018, master's thesis Keywords: wastes, biodegradable wastes, food waste, oil waste, black soldier fly, Hermetia illucens, larvae, prepupae, waste reduction, gut microbiota, sequencing
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5. Evaluation of human milk microbiota by 16S rRNA gene next-generation sequencing (NGS) and cultivation/MALDI-TOF mass spectrometry identificationPrimož Treven, Aleksander Mahnič, Maja Rupnik, Majda Golob, Tina Pirš, Bojana Bogovič Matijašić, Petra Mohar Lorbeg, 2019, original scientific article Keywords: milk microbiota, microbiota assembly, breastfeeding, breast pump, probiotic drops
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6. Antibiotic resistance, virulence factors, phenotyping, and genotyping of E. coli isolated from the feces of healthy subjectsStefano Raimondi, Lucia Righini, Francesco Candeliere, Eliana Musmeci, Francesca Bonvicini, Giovanna Gentilomi, Marjanca Starčič Erjavec, Alberto Amaretti, Maddalena Rossi, 2019, original scientific article Keywords: Escherichia coli, typing, gut microbiota, PFGE, pulsed-field gel electrophoresis, virulence, antibiotic resistance, conjugation, curli, co-occurrence
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7. Escherichia coli affects expression of circadian clock genes in human hepatoma cellsUrša Kovač, Zala Žužek, Lucija Raspor Dall'Olio, Katka Pohar, Alojz Ihan, Miha Moškon, Damjana Rozman, Marjanca Starčič Erjavec, 2021, original scientific article Keywords: intestinal microbiota, Escherichia coli, circadian clock, circadian rhythm, HepG2
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8. Regulation of oxygen homeostasis at the intestinal epithelial barrier siteŠpela Konjar, Miha Pavšič, Marc Veldhoen, 2021, review article Keywords: oxygen, mitochondria, hypoxia, microbiota, IBD
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