1. Expression of cytokine-coding genes BMP8B, LEFTY1 and INSL5 could distinguish between ulcerative colitis and Crohn's diseaseDaša Jevšinek Skok, Nina Hauptman, Miha Jerala, Nina Zidar, 2021, original scientific article Keywords: inflammatory bowel disease, ulcerative colitis, Crohn's disease, inflammatory cytokines, expression, bioinformatics approach, experimental validation
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2. Metastatic EMT phenotype is governed by microRNA-200-mediated competing endogenous RNA networksSara Uhan, Nina Hauptman, 2022, review article Keywords: epithelial–mesenchymal transition, microRNA-200 family, epigenetic factors, EMT, ceRNA, lncRNA
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3. The integrative knowledge base for miRNA-mRNA expression in colorectal cancerDaša Jevšinek Skok, Nina Hauptman, Emanuela Boštjančič, Nina Zidar, 2019, original scientific article Keywords: web aplication, RNA expression, colorectal cancer, gene expression, knowledge base, cancer genome atlas, miRNA, mRNA, gene correlation, target genes
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4. Expression of fibrosis-related genes in liver and kidney fibrosis in comparison to inflammatory bowel diseasesMiha Jerala, Nina Hauptman, Nika Kojc, Nina Zidar, 2022, original scientific article Keywords: inflammatory bowel diseases, fibrosis, Crohn’s disease, ulcerative colitis, gene expression
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6. Circulating tumor DNA methylation biomarkers for characterization and determination of the cancer origin in malignant liver tumorsTina Draškovič, Nina Zidar, Nina Hauptman, 2023, review article Keywords: malignant liver tumors, liver metastases, biopsy, primary malignant liver tumors, liquid biopsy, cell-free DNA, circulating tumor DNA, tissue of origin determination, DNA methylation
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