1. Determinante aktivacije in temperaturne stabilnosti pernizina, serinske proteinaze iz hipertermofilne arheje Aeropyrum pernix K1Miha Bahun, 2020, doctoral dissertation Keywords: subtilizin, Aeropyrum pernix, pernizin, proregija, aktivacija, termostabilnost
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2. Priprava receptor vezavne domene proteina S virusa SARS-CoV-2 v bakterijah Escherichia coliEma Sajovic, 2023, master's thesis Keywords: cirkularni dikroizem, delta plus, Escherichia coli, inkluzijska telesca, NaDS-PAGE, postopna dializa, protein bodice, receptor vezavna domena, SARS-CoV-2, urea
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3. Vrednotenje fuzijskega poročevalskega kompleksa mCherry in proteaze kaminizin v bakteriji Streptomyces rimosusTeja Nusdorfer, 2024, master's thesis Keywords: streptomicete, Streptomyces rimosus, heterologno izražanje, kaminizin, mCherry, fuzijski protein, fluorescenca, proteolitična aktivnost
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4. Inhibition of the SARS-CoV-2 3CL$^{pro}$ main protease by plant polyphenolsMiha Bahun, Marko Jukič, Domen Oblak, Luka Kranjc, Gregor Bajc, Matej Butala, Krištof Bozovičar, Tomaž Bratkovič, Črtomir Podlipnik, Nataša Poklar Ulrih, 2022, original scientific article Keywords: edible plants, polyphenols, COVID-19, SARS-CoV-2, 3CL$^{pro}$, protease inhibitor
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5. High selectivity of the hyperthermophilic subtilase propeptide domain toward inhibition of its cognate proteaseMiha Bahun, Nataša Poklar Ulrih, 2023, original scientific article Keywords: hyperthermophile, subtilase, propeptide, enzyme activation, enzyme inhibition, protein stability
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6. A novel simple fluorometric protease assay for monitoring hydrolysis of proteins in real timeMiha Bahun, Nataša Poklar Ulrih, 2025, original scientific article Keywords: protease assay, proteolysis, subtilisin, SYPRO orange, fluorescence, real-time PCR, thermostability
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7. Identification of triazolopyrimidinyl scaffold SARS-CoV-2 papain-like protease (PL$^{pro}$) inhibitorSebastjan Kralj, Marko Jukič, Miha Bahun, Luka Kranjc, Anja Kolarič, Milan Hodošček, Nataša Poklar Ulrih, Urban Bren, 2024, original scientific article Keywords: drug design, protease inhibitor, SARS-CoV-2, papain-like protease, PL$^{pro}$, antiviral design, in silico drug design, CADD, virtual screening, HTVS, structure-based design
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