1. Helicobacter labacensis sp. nov., Helicobacter mehlei sp. nov., and Helicobacter vulpis sp. nov., isolated from gastric mucosa of red foxes (Vulpes vulpes)Igor Gruntar, Bojan Papić, Mateja Pate, Urška Zajc, Matjaž Ocepek, Darja Kušar, 2020, original scientific article Keywords: Helicobacter, novel species, red fox, Vulpes vulpes, gastric mucosa
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2. Salmonella Infantis in broiler flocks in SloveniaMateja Pate, Jasna Mićunović, Majda Golob, Lene Karine Vestby, Matjaž Ocepek, 2019, original scientific article Keywords: Poultry diseases-drug therapy, Salmonella infections, animal-microbiology, biofilms-drug effects, chickens-microbiology, drug resistance, multiple, bacterial, feces-microbiology, genetic variation, microbial sensitivity tests, serogroup, Slovenia
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3. Antimicrobial resistance and virulence genes in Enterococcus faecium and Enterococcus faecalis from humans and retail red meatMajda Golob, Mateja Pate, Darja Kušar, Urška Dermota, Jana Avberšek, Bojan Papić, Irena Zdovc, 2019, original scientific article Keywords: Anti-bacterial agents - pharmacology, drug resistance bacterial - genetics, Enterococcus faecalis - genetics - drug effects - growth & development, Enterococcus faecium - genetics - drug effects - growth & development, virulence factors - genetics, meat - microbiology, vancomycin resistance - genetics, models animal, veterinary drugs
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4. A suggested diagnostic approach for sporadic anthrax in cattle to protect public healthJana Avberšek, Jasna Mićunović, Vasilij Cociancich, Tomislav Paller, Darja Kušar, Urška Zajc, Matjaž Ocepek, Silvio Špičić, Sanja Duvnjak, Mateja Pate, 2021, original scientific article Keywords: anthrax, cattle, diagnostics, multiple-locus variable-number tandem repeat analysis (MLVA), public health, real-time PCR
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5. Source tracking on a dairy farm reveals a high occurrence of subclinical mastitis due to hypervirulent Listeria monocytogenes clonal complexesBojan Papić, Majda Golob, Darja Kušar, Mateja Pate, Irena Zdovc, 2019, original scientific article Keywords: Listeria monocytogenes, food safety, whole‐genome sequencing, pulsed‐field gel electrophoresis, virulence, cattle
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6. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, original scientific article Keywords: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats
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7. Mycobacteria in aquarium fishMateja Pate, Andrej Ovca, Vlasta Jenčič, Marija Žolnir-Dovč, Matjaž Ocepek, 2019, original scientific article Keywords: fish tank granuloma, fish tuberculosis, mycobacteria, questionnaire, zoonosis
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8. Management of a Coxiella burnetii-infected sheep flock after an outbreak of Q fever in humansJana Avberšek, Mateja Pate, Andrej Škibin, Matjaž Ocepek, Branko Krt, 2019, original scientific article Keywords: Coxiella burnetii, Q fever - prevention and control, sheep, vaccination, serology
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9. Genetic diversity of Listeria monocytogenes strains in ruminant abortion and rhombencephalitis cases in comparison with the natural environmentBojan Papić, Mateja Pate, Benjamin Félix, Darja Kušar, 2019, original scientific article Keywords: Microbiology - veterinary, Listeria monocytogenes - genetics, listeriosis, PFGE, MLST, population structure, cattle
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10. Antimicrobial resistance and molecular characterization of methicillin-resistant Staphylococcus aureus from two pig farmsMajda Golob, Mateja Pate, Darja Kušar, Urška Zajc, Bojan Papić, Matjaž Ocepek, Irena Zdovc, Jana Avberšek, 2022, original scientific article Keywords: livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA), pigs, multidrug resistance (MDR), spa typing, longitudinal study
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