1. Loss of H3K27me3 expression in canine nerve sheath tumorsKristina Tekavec, Tanja Švara, Tanja Knific, Jernej Mlakar, Mitja Gombač, Carlo Cantile, 2022, original scientific article Keywords: dog, nerve sheath tumor, immunohistochemistry, methylation, H3K27me3, nerve sheath neoplasms
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2. Upregulation of cathepsin X in glioblastomaBernarda Majc, Anamarija Habič, Metka Novak, Ana Rotter, Andrej Porčnik, Jernej Mlakar, Vera Župunski, Urša Pečar Fonović, Damijan Knez, Nace Zidar, Stanislav Gobec, Janko Kos, Tamara Lah Turnšek, Anja Pišlar, Barbara Breznik, 2022, original scientific article Keywords: glioblastoma, cathepsin X, γ-enolase, tumor microenvironment, glioblastoma stem cells, cathepsin X inhibitors
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3. Sporadic Creutzfeldt–Jakob disease is associated with reorganization of metabolic connectivity in a pathological brain networkTomaž Rus, Jernej Mlakar, Luka Ležaič, An Vo, Nha Nguyen, Chris Chengke Tang, Michele Fiorini, Elena Prieto, Gloria Martí Andrés, Javier Arbizu, David Eidelberg, Maja Trošt, 2023, original scientific article Keywords: brain networks, Creutzfeldt–Jakob disease, Creutzfeldt–Jakob disease-related pattern, FDG-PET, graph theory
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4. Large-scale transcriptomics-driven approach revealed overexpression of CRNDE as a poor survival prognosis biomarker in glioblastomaMaxim Sorokin, Mikhail Raevskiy, Alja Zottel, Neja Šamec, Marija Skoblar Vidmar, Alenka Matjašič, Andrej Zupan, Jernej Mlakar, Maria Suntsova, Denis V. Kuzmin, Anton A. Buzdin, Ivana Jovchevska, 2021, original scientific article Keywords: glioblastoma, noncoding RNA, long-term survival, CRNDE, RNA sequencing
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5. Anti-vimentin, anti-TUFM, anti-NAP1L1 and anti-DPYSL2 nanobodies display cytotoxic effect and reduce glioblastoma cell migrationAlja Zottel, Ivana Jovchevska, Neja Šamec, Jernej Mlakar, Jernej Šribar, Igor Križaj, Marija Skoblar Vidmar, Radovan Komel, 2020, original scientific article Keywords: glioblastoma, glioblastoma stem cells, nanobodies, cell migration, cytotoxicity, vimentin, DPYSL2, NAP1L1, TUFM
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6. High FREM2 gene and protein expression are associated with favorable prognosis of IDH-WT glioblastomasIvana Jovchevska, Alja Zottel, Neja Šamec, Jernej Mlakar, Maxim Sorokin, Daniil Nikitin, Anton A. Buzdin, Radovan Komel, 2019, original scientific article Keywords: glioblastoma, malignancy, FREM2, SPRY1, TCGA
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7. CCR5-mediated signaling is involved in invasion of glioblastoma cells in its microenvironmentMetka Novak, Miha Koprivnikar Krajnc, Barbara Hrastar, Barbara Breznik, Bernarda Majc, Mateja Mlinar, Ana Rotter, Andrej Porčnik, Jernej Mlakar, Katja Stare, Richard G. Pestell, Tamara Lah Turnšek, 2020, original scientific article Keywords: CCL5, CCR5, chemokines, glioblastoma, invasion, maraviroc, mesenchymal stem cells
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8. Analysis of miR-9-5p, miR-124-3p, miR-21-5p, miR-138-5p, and miR-1-3p in glioblastoma cell lines and extracellular vesiclesAlja Zottel, Neja Šamec, Ana Kump, Lucija Raspor Dall'Olio, Pia Pužar Dominkuš, Rok Romih, Samo Hudoklin, Jernej Mlakar, Daniil Nikitin, Maxim Sorokin, Anton A. Buzdin, Ivana Jovchevska, Radovan Komel, 2020, original scientific article Keywords: glioblastoma, biomarkers, exosomes, small extracellular vesicles, miRNA, miR-9-5p, miR-21-5p, miR-124-3p, miR-138-5p, vimentin
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9. Metabolic brain changes can predict the underlying pathology in neurodegenerative brain disordersTomaž Rus, Jernej Mlakar, Jan Jamšek, Maja Trošt, 2023, other scientific articles Keywords: Creutzfeldt–Jakob disease, Parkinson’s disease, multiple co-proteinopathy, FDG PET, brain networks analysis
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10. Bioinformatic and clinical experimental assay uncovers resistance and susceptibility mechanisms of human glioblastomas to temozolomide and identifies new combined and individual survival biomarkers outperforming MGMT promoter methylationAlexander Modestov, Ivana Jovchevska, Jernej Mlakar, Anton A. Buzdin, 2024, original scientific article Keywords: DNA repair pathways, gene expression biomarker, glioblastoma, MGMT, Oncobox drug score, WHO CNS5
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