11. Analysis of the global population structure of Paenibacillus larvae and outbreak investigation of American foulbrood using a stable wgMLST schemeBojan Papić, Margo Diricks, Darja Kušar, 2021, original scientific article Keywords: Paenibacillus larvae, American foulbrood, whole-genome sequencing, whole-genome multilocus sequence typing, core-genome multilocus sequence typing, whole-genome single nucleotide polymorphism, genotype, molecular sequence Full text (file, 2,30 MB) This document has more files! More... |
12. Using whole-genome sequencing to assess the diversity of Paenibacillus larvae within an outbreak and a beekeeping operationBojan Papić, Majda Golob, Irena Zdovc, Jana Avberšek, Metka Pislak, Darja Kušar, 2021, original scientific article Keywords: Paenibacillus larvae, American foulbrood, AFB, whole-genome sequencing, WGS, whole-genome multilocus sequence typing, wgMLST, outbreak, beekeeping operation, molecular sequence data, genotype Full text (file, 1,11 MB) This document has more files! More... |
13. Antimicrobial resistance and virulence genes in Enterococcus faecium and Enterococcus faecalis from humans and retail red meatMajda Golob, Mateja Pate, Darja Kušar, Urška Dermota, Jana Avberšek, Bojan Papić, Irena Zdovc, 2019, original scientific article Keywords: Anti-bacterial agents - pharmacology, drug resistance bacterial - genetics, Enterococcus faecalis - genetics - drug effects - growth & development, Enterococcus faecium - genetics - drug effects - growth & development, virulence factors - genetics, meat - microbiology, vancomycin resistance - genetics, models animal, veterinary drugs Full text (outside link) |
14. Source tracking on a dairy farm reveals a high occurrence of subclinical mastitis due to hypervirulent Listeria monocytogenes clonal complexesBojan Papić, Majda Golob, Darja Kušar, Mateja Pate, Irena Zdovc, 2019, original scientific article Keywords: Listeria monocytogenes, food safety, whole‐genome sequencing, pulsed‐field gel electrophoresis, virulence, cattle Full text (file, 160,93 KB) This document has more files! More... |
15. Retrospective investigation of listeriosis outbreaks in small ruminants using different analytical approaches for whole genome sequencing-based typing of Listeria monocytogenesBojan Papić, Darja Kušar, Irena Zdovc, Majda Golob, Mateja Pate, 2020, original scientific article Keywords: epidemiology, veterinary, Listeria monocytogenes, outbreak, whole-genome sequencine, single nucleotide polymorphism, multilocus sequence typing, sheep, goats Full text (file, 537,70 KB) This document has more files! More... |
16. Genetic diversity of Listeria monocytogenes strains in ruminant abortion and rhombencephalitis cases in comparison with the natural environmentBojan Papić, Mateja Pate, Benjamin Félix, Darja Kušar, 2019, original scientific article Keywords: Microbiology - veterinary, Listeria monocytogenes - genetics, listeriosis, PFGE, MLST, population structure, cattle Full text (outside link) |
17. Biotehnološki potencial metagenomskih knjižnic iz mikrobnih skupnosti kraških jamBojan Papić, 2015, master's thesis Keywords: mikrobna ekologija, mikrobne združbe, jamska mikrobiologija, metagenomika, metagenomske knjižnice, bioinformatika, biotehnološki potencial, bioaktivne snovi Full text (file, 3,70 MB) |
18. Antimicrobial resistance and molecular characterization of methicillin-resistant Staphylococcus aureus from two pig farmsMajda Golob, Mateja Pate, Darja Kušar, Urška Zajc, Bojan Papić, Matjaž Ocepek, Irena Zdovc, Jana Avberšek, 2022, original scientific article Keywords: livestock-associated methicillin-resistant Staphylococcus aureus (LA-MRSA), pigs, multidrug resistance (MDR), spa typing, longitudinal study Full text (file, 1,24 MB) This document has more files! More... |
19. Helicobacter colisuis sp. nov., isolated from caecal contents of domestic pigs (Sus scrofa domesticus)Igor Gruntar, Rok Kostanjšek, Tina Pirš, Bojan Papić, 2022, original scientific article Keywords: Helicobacter, polymerase chain reaction, Sus scrofa, caecum, domestic pig, Sus scrofa domesticus, novel species Full text (file, 4,46 MB) This document has more files! More... |
20. Phylogeography of Brucella suis biovar 2 with focus on Slovenian wildlifeBojan Papić, Darja Kušar, Branko Krt, Matjaž Ocepek, Jana Avberšek, 2023, original scientific article Keywords: Brucella suis, biovar 2, wildlife, whole-genome sequencing Full text (file, 1,33 MB) This document has more files! More... |