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1. Generation of genome-wide SNP markers from minimally invasive sampling in endangered animals and applications in species ecology and conservation
Hans Recknagel, Luka Močivnik, Valerija Zakšek, Yonglun Luo, Rok Kostanjšek, Peter Trontelj, 2024, original scientific article

Keywords: amphibians, conservation genetics, environmental DNA, genomics, proteomics, microbial biology, empirical population genetics
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2. From cave dragons to genomics
Hans Recknagel, Peter Trontelj, 2022, original scientific article

Keywords: cave adaptation, troglomorphism, salamanders, selection, biomedicine
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3. Multiple transitions between realms shape relict lineages of Proteus cave salamanders
Hans Recknagel, Valerija Zakšek, Teo Delić, Špela Gorički, Peter Trontelj, 2024, original scientific article

Keywords: diversity, evolutionary transitions, olm, phylogeography, Proteus anguinus, subterranean environments
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4. Investigating the genetic basis of vertebrate dispersal combining RNA-seq, RAD-seq and quantitative genetics
Luis M. San-Jose, Elvire Bestion, Félix Pellerin, Murielle Richard, Lucie Di Gesu, Jordi Salmona, Laurane Winandy, Delphine Legrand, Camille Bonneaud, Hans Recknagel, 2023, original scientific article

Keywords: behaviour, circadian clock, dispersal, gene expression, genomics
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5. The functional genetic architecture of egg-laying and live-bearing reproduction in common lizards
Hans Recknagel, Madeleine Carruthers, Andrey A. Yurchenko, Mohsen Nokhbatolfoghahai, Nicholas A. Kamenos, Maureen M. Bain, K. R. Elmer, 2021, original scientific article

Keywords: evolutionary transition, oviparity, viviparity, genome-wide association mapping
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6. Evolutionary origins of viviparity consistent with palaeoclimate and lineage diversification
Hans Recknagel, Nicholas A. Kamenos, K. R. Elmer, 2021, original scientific article

Keywords: cold-climate hypothesis, diversification, evolutionary transitions, life-history tactics, squamate reptiles
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7. Chromosome-level assembly of the common lizard (Zootoca vivipara) genome
Andrey A. Yurchenko, Hans Recknagel, K. R. Elmer, 2020, original scientific article

Keywords: linkage map, lizard genome, multiple paternity, reptile genomics
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8. Distinct telomere differences within a reproductively bimodal common lizard population
Darryl McLennan, Hans Recknagel, K. R. Elmer, Pat Monaghan, 2019, original scientific article

Keywords: life-history variation, oviparity, physiological state, squamate, viviparity
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9. Differential reproductive investment in co-occurring oviparous and viviparous common lizards (Zootoca vivipara) and implications for life-history trade-offs with viviparity
Hans Recknagel, K. R. Elmer, 2019, original scientific article

Keywords: reproductive investment, live-bearing, egg-laying, reptile, body size
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10. RADseq and mate choice assays reveal unidirectional gene flow among three lamprey ecotypes despite weak assortative mating
John B. Hume, Hans Recknagel, Colin W. Bean, Colin E. Adams, Barbara K. Mable, 2018, original scientific article

Keywords: parazitski, non-parasitic, anadromous, hybridization, speciation
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