Bibliografija osebe. Seznam zajema vsa gradiva in ne le tista, kje je oseba mentor.

Diplomska dela (2)

1. Žiga Fišer: Znotrajvrstna raznolikost istrske slepe postranice Niphargus krameri
2. Teo Delić: Vpliv poledenitve na filogeografsko strukturo slepe postranice Niphargus stygius

Druga dela (11)

1. Ester Premate, Špela Borko, Simona Kralj-Fišer, Michael Jennions, Žiga Fišer, Gergely Balázs, Anna Bíró, Gregor Bračko, Denis Copilaş-Ciocianu, Nuša Hrga, Gábor Herczeg, Behare Rexhepi, Maja Zagmajster, Valerija Zakšek, Lutz Fromhage, Cene Fišer: No room for males in caves
2. Hans Recknagel, Luka Močivnik, Valerija Zakšek, Yonglun Luo, Rok Kostanjšek, Peter Trontelj: Generation of genome-wide SNP markers from minimally invasive sampling in endangered animals and applications in species ecology and conservation
3. Žiga Fišer, Valerija Zakšek, Cene Fišer, Florian Altermatt, Tea Knapič: Morphologically cryptic amphipod species are ˝ecological clones˝ at regional but not at local scale
4. Valerija Zakšek, Cene Fišer, Dorottya Angyal, Gergely Balázs, Virág Krízsik: Redescription of two subterranean amphipods Niphargus molnari Méhely, 1927 and Niphargus gebhardti Schellenberg, 1934 (Amphipoda, Niphargidae) and their phylogenetic position
5. Peter Trontelj, Cristophe J. Douady, Cene Fišer, Janine Gibert, Špela Gorički, Tristan Lefébure, Boris Sket, Valerija Zakšek: A molecular test for cryptic diversity in ground water: how large are the ranges of macro-stygobionts?
6. Peter Trontelj, Špela Gorički, Slavko Polak, Rudi Verovnik, Valerija Zakšek, Boris Sket: Age estimates for some subterranean taxa and lineages in the Dinaric Karst
7. Maja Zagmajster, Teo Delić, Simona Prevorčnik, Valerija Zakšek: New records and unusual morphology of the cave hydrozoan Velkovrhia enigmatica Matjašič & Sket, 1971 (Cnidaria: Hydrozoa: Bougainvilliidae)
8. Slavko Polak, Jana Bedek, Roman Ozimec, Valerija Zakšek: Subterranean fauna of twelve Istrian caves
9. Hans Recknagel, Valerija Zakšek, Teo Delić, Špela Gorički, Peter Trontelj: Multiple transitions between realms shape relict lineages of Proteus cave salamanders
10. Cene Fišer, Špela Borko, Teo Delić, Anja Kos, Ester Premate, Peter Trontelj, Maja Zagmajster, Valerija Zakšek: Izzivi varovanja skrite naravne dediščine podzemnih voda Slovenije
11. Maja Zagmajster, Špela Borko, Gregor Bračko, Teo Delić, Cene Fišer, Ester Premate, Monika Šafhauzer, Peter Trontelj, Valerija Zakšek, Jasminko Mulaomerović: SubBIOCOD