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Nekroptozna aktivnost N-končne domene MLKL v celicah HEK in njeno izražanje v E. coli
ID Kozole, Evgen (Author), ID Gunčar, Gregor (Mentor) More about this mentor... This link opens in a new window

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Abstract
Celična smrt je ključni biološki proces za vzdrževanje homeostaze in obrambo organizma pred okuženimi, mutiranimi ali poškodovanimi celicami. V omenjenih primerih lahko celica sproži signalni odziv, ki pripelje do apoptoze, kontrolirane celične smrti ali do nekroze, nekontrolirane celične smrti. V zadnjem desetletju je veliko pozornosti pritegnila nekroptoza, za katero velja, da je do neke mere kontroliran proces, kateremu sledijo patološka stanja, ki niso kontrolirana, kot je na primer vnetje. Glavni posrednik signalnega odziva pri nekroptozi je MLKL (angl. mixed-lineage kinase domain-like), ki je sestavljen iz psevdokinazne domene in domene svežnja štirih vijačnic (4HB). Študije so pokazale, da je 4HB domena odgovorna za oligomerizacijo in translokacijo MLKL na celično membrano, kjer povzroči njeno permeabilizacijo. V magistrskem delu smo želeli preveriti ali skrajšan del MLKL, ki obsega 123 aminokislinskih ostankov in predstavlja 4HB domeno, povroči celično smrt. MLKL123 smo uspešno izrazili v bakterijskem ekspresijskem sevu E. coli BL21 pLysS in ga tudi izolirali z afinitetno kromatografijo, vendar so se tekom izolacije pojavile težave, saj so se poleg lis, ki so predstavljale naš protein, pojavljale tudi nekatere ostale nespecifične lise (potencialni razgradni produkti pri izražanju). Prav tako smo v sesalski celični liniji HEK FlpIn-293 uspešno pripravili dve stabilni liniji, ena je vsebovala samo MLKL123, druga pa je poleg proteina vsebovala še fuzijski protein EGFP, ki je služil za lažje opazovanje s fluorescenčnim konfokalnim mikroskopom. V obeh primerih smo ugotovili, da se je protein pretežno nahajal v predelu celične membrane, vendar je test MTT pokazal, da nobeden od konstruktov ne izkazuje citotoksičnosti, kljub okrogli morfologiji celic.

Language:Slovenian
Keywords:MLKL, MLKL123, nekroptoza, HEK-FlpIn-293 celice
Work type:Master's thesis/paper
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2024
PID:20.500.12556/RUL-163951 This link opens in a new window
Publication date in RUL:14.10.2024
Views:82
Downloads:25
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Secondary language

Language:English
Title:Necroptotic activity of N-terminal domain of MLKL in HEK cells and its expression in E. coli
Abstract:
Cell death is a key biological process for maintaining homeostasis and defending the organism against infected, mutated or damaged cells. In the mentioned cases, the cell can trigger a signaling response that leads to apoptosis, controlled cell death, or to necrosis, uncontrolled cell death. In the last decade, much attention has been drawn to necroptosis, which is considered to be a somewhat controlled process followed by pathological conditions that are not controlled, such as inflammation. The main mediator of the signal response in necroptosis is MLKL (mixed-lineage kinase domain-like), which consists of a pseudokinase domain and a four-helix bundle (4HB) domain. Studies have shown that the 4HB domain is responsible for the oligomerization and translocation of MLKL to the cell membrane, where it causes its permeabilization. In the Master's thesis, we wanted to check whether a shortened part of MLKL, which consists of 123 amino acid residues and represents the 4HB domain, compensates for cell death. We successfully expressed MLKL123 in the bacterial expression strain E. coli BL21 pLysS and isolated it using affinity chromatography, but problems arose during the isolation, as in addition to the bands that represented our protein, some other non-specific bands appeared (potential degradation expression products). We also successfully prepared two stable lines in the mammalian cell line HEK FlpIn-293, one containing only MLKL123, and the other containing, in addition to the protein, the EGFP fusion protein, which served for easier observation with a fluorescence confocal microscope. In both cases, we found that the protein was mainly located in the area of the cell membrane, but the MTT test showed that none of the constructs showed cytotoxicity, despite the round morphology of the cells.

Keywords:MLKL, MLKL123, necroptosis, HEK-FlpIn-293 cells

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