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Izražanje rekombinantne cisteinske proteaze Cwp84 v bakteriji Escherichia coli
ID Oletič, Michelle (Author), ID Novinec, Marko (Mentor) More about this mentor... This link opens in a new window

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Abstract
Ena izmed najbolj pogostih bolnišničnih okužb je okužba z bakterijo Clostridioides difficile, ki povzroča hudo in ponavljajočo se diarejo. Zadnje čase okužbo s to bakterijo povezujejo tudi s primeri kolitisa. Patogenost bakterije izhaja iz toksinov A in B, je pa tudi ključen korak kolonizacija črevesja. Pri tem so ključni proteini S-plasti. Najpomembnejši protein S-plasti je protein površinske plasti A (SlpA), ki homogeno sestavlja celotno S-plast. Še bolj pomemben pa je proces samosestavljanja te plasti, pri katerem sodeluje cisteinska proteaza Cwp84. Cwp84, 84 kDa velik membranski encim, pred začetkom sestavljanja S-plasti cepi SlpA na dve enoti, eno z nizko molekularno maso (LMW) in drugo z visoko molekularno maso (HMW). Bakterije v obliki spor so v človeškem telesu skoraj nedostopne imunskemu sistemu, zato je pomembno raziskati načine, ki bi lahko inhibirali pravilno zorenje S-plasti in njeno samosestavljanje. Predvidevali smo, da bi inhibicijo cisteinske proteaze Cwp84 lahko izkoristili za razvoj protimikrobnih sredstev v kombinaciji z antibiotiki. Zato smo želeli v sklopu magistrske naloge izraziti fragment encima Cwp84, ki vsebuje katalitično in lektinu podobno domeno. V ta namen smo zapis za fragment encima Cwp84 vključili v dva vektorja, eden od teh je imel fuzijsko oznako GST, ki bi nam pomagala pri pravilnem zvijanju encima in njegovi izolaciji. Kljub več poskusom encima Cwp84 nismo uspeli izraziti in pomeriti njegovih kinetičnih lastnosti.

Language:Slovenian
Keywords:Cwp84, SlpA, Clostridioides difficile, GST
Work type:Master's thesis/paper
Typology:2.09 - Master's Thesis
Organization:FKKT - Faculty of Chemistry and Chemical Technology
Year:2024
PID:20.500.12556/RUL-162583 This link opens in a new window
COBISS.SI-ID:216124419 This link opens in a new window
Publication date in RUL:25.09.2024
Views:118
Downloads:29
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Secondary language

Language:English
Title:Expression of recombinant cysteine protease Cwp84 in Escherichia coli
Abstract:
One of the most common hospital-acquired infections is Clostridioides difficile infection, which causes severe and recurrent diarrhoea. Recently, infection with this bacterium has also been associated with cases of colitis. The pathogenicity of the bacterium is derived from toxins A and B, but colonisation of the gut is also a key step. The S-layer proteins are key to this process. The most important S-layer protein is surface layer protein A (SlpA), which homogeneously builds the entire S-layer. Even more important is the self-assembly process of this layer, which involves the cysteine protease Cwp84. Cwp84, an 84 kDa membrane enzyme, cleaves SlpA into two subunits, one with a low molecular weight (LMW) and the other with a high molecular weight (HMW), before starting to assemble the S-layer. Spore-forming bacteria are almost inaccessible to the immune system in the human body, so it is important to investigate ways that could inhibit the proper maturation of the S-layer and its self-assembly. We assumed that inhibition of the cysteine protease Cwp84 could be used for the development of antimicrobial agents in combination with antibiotics. Therefore, as part of my master thesis, we wanted to express a fragment of the Cwp84 enzyme containing a catalytic and a lectin-like domain. To this end, we included the notation of Cwp84 enzyme fragment in two vectors, one of which had a GST fusion tag that would help us to properly fold the enzyme and isolate it. Despite several attempts, we have not been able to express and quantify the kinetic properties of the Cwp84 enzyme.

Keywords:Cwp84, SlpA, Clostridioides difficile, GST

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