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Uropatogenost humanih sevov bakterije Escherichia coli na biomimetičnem in vitro modelu prašičjega urotelija
ID Predojević, Luka (Author), ID Starčič Erjavec, Marjanca (Mentor) More about this mentor... This link opens in a new window, ID Erdani Kreft, Mateja (Co-mentor)

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Abstract
Okužbe sečil so lahko hude, včasih tudi smrtne bolezni, katerih etiološki patogeni so pretežno uropatogeni sevi bakterije Escherichia coli (UPEC). Za raziskovanje patogeneze UPEC je bilo že vzpostavljenih več modelov z manjšimi ali večjimi pomanjkljivostmi. Cilj te disertacije je bil razviti preprost, razmeroma hitro pripravljen in poceni biomimetični in vitro model, ki temelji na celicah normalnega prašičjega urotelija (NPU), ki je genetsko in fiziološko podoben uroteliju človeškega mehurja, ter izvesti osnovne študije patogenosti E. coli. Sprva je bil model testiran z uporabo niza kontrolnih sevov E. coli (J96, 536, SE15 in MG1655), nato pa s človeškimi sevi E. coli, izoliranimi bodisi iz urina bolnikov z okužbami sečil bodisi iz blata zdravih posameznikov. Patogenost posameznih testiranih sevov smo določali na osnovi viabilnosti celic NPU. Za vizualizacijo subceličnih dogodkov smo izvedli presevno in vrstično elektronsko mikroskopijo. Seve smo testirali na prisotnost različnih genov, povezanih z virulenco, filogenetsko skupino, vrsto oligosaharida sredice lipopolisaharida, O-serotip, ugotavljali tip lipopolisaharida, sposobnost tvorbe biofilma ter izvedli statistično analizo možnih korelacijskih razmerij med lastnostmi sevov in učinkom na preživetje celic NPU. Ocenili smo tudi citokinski odziv celic NPU na različne seve E. coli. Rezultati so pokazali, da ima vzpostavljen biomimetični urotelijski model diskriminatorno moč, da razlikuje patogene od nepatogenih sevov E. coli in identificira nove, potencialno patogene seve ter razkrije citokinski odziv urotelijskih celic.

Language:Slovenian
Keywords:E. coli, uropatogenost, virulentni dejavniki, citokini, elektronska mikroskopija
Work type:Doctoral dissertation
Typology:2.08 - Doctoral Dissertation
Organization:BF - Biotechnical Faculty
Publisher:[L. Predojević]
Year:2024
PID:20.500.12556/RUL-155737 This link opens in a new window
UDC:577.112:66(043.3)
COBISS.SI-ID:193140227 This link opens in a new window
Publication date in RUL:14.04.2024
Views:99
Downloads:20
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Secondary language

Language:English
Title:Uropathogenicity of human Escherichia coli strains employing an in vitro biomimetic model of porcine urothelium
Abstract:
Urinary tract infections can be severe, sometimes fatal, diseases whose etiological pathogens are predominantly uropathogenic strains of Escherichia coli (UPEC). To investigate the UPEC pathogenesis, several models have already been established with minor or major disadvantages. The aim od this thesis was to develop a simple, fast, and inexpensive biomimetic in vitro model based on normal porcine urothelial (NPU) cells that are genetically and physiologically similar to human bladder urothelium and to perform basic studies of E. coli pathogenicity. Initially, the model was tested using a set of control E. coli strains (J96, 536, SE15 and MG1655) and, subsequently, with human E. coli strains isolated either from urine of patients with urinary infections or from feces of healthy individuals. Pathogenicity of the individual strain tested was detrmined by viability of NPU cells. To visualize the subcellular events, transmission and scanning electron microscopy was performed. The strains were tested for the presence of different virulence-associated genes, phylogroup, type of core lipid, O-serotype, type of lipopolysaccharide, and ability to form biofilms. Statistical analysis of possible correlations between strains’ characteristics and the effect on survival of the NPU cells was performed. We also assessed the cytokine response of the NPU cells to different E. coli strains. Results showed that our model has the discriminatory power to distinguish pathogenic from non-pathogenic E. coli strains, and to identify new, potentially pathogenic strains and to reveal the cytokine response of the NPU cells.

Keywords:E. coli, uropathogenicity virulence factors, cytokines, electron microscopy

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