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Vloga segmentov molekule Ninjurin 1 v poškodbi celične membrane
ID Smrekar, Eva (Avtor), ID Hafner Bratkovič, Iva (Mentor) Več o mentorju... Povezava se odpre v novem oknu

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Izvleček
Ninjurin-1 (NINJ1) je transmembranski protein, ključen pri posredovanju poškodbe celične membrane pri nekaterih oblikah litične celične smrti, vključno s piroptozo. Ninjurin-2 (NINJ2), ki je pri sesalcih drugi predstavnik družine ninjurinov, ne sodeluje pri poškodbi celične membrane. Z magistrskim delom smo želeli pridobiti vpogled v mehanizem, po katerem NINJ1 posreduje poškodbo celične membrane. Načrtovali in izdelali smo točkovne mutante in skrajšane različice NINJ1. Glede na poravnavo aminokislinskih zaporedij NINJ1 in NINJ2 smo načrtovali tudi himere NINJ1 in NINJ2, kjer smo med njima opravili zamenjavo posameznih segmentov. Konstrukte smo z lipofekcijo vnesli v celice HEK 293T, kjer smo po 24 urah merili celično smrt preko privzema barvila propidijev jodid ter aktivnosti laktat dehidrogenaze. Izražanje proteinov smo ovrednotili s prenosom western, izražanje na celični membrani pa s pretočno citometrijo, zaradi česar smo konstrukte opremili z oznakami FLAG in HA. Z modro nativno gelsko elektroforezo smo pokazali, da NINJ1 oligomerizira in opazili oligomere višjega reda, ki so bili pri NINJ2 prisotni v manjši meri. Pokazali smo, da so proteini, ki so bili zmožni posredovanja PMR, zmožni tudi oligomerizacije. Pokazali smo, da imata za posredovanje PMR pomembno vlogo predvidena regija amfipatične vijačnice in citosolna domena, medtem ko so transmembranski vijačnici 1 in 2 ter zunajcelični C-konec izmenljivi med NINJ1 in NINJ2. Vpliva N-konca (adhezijskega motiva NINJ1) zaradi nasprotujočih rezultatov nismo mogli opredeliti. Naši rezultati nakazujejo na pomembno vlogo amfipatične vijačnice in citosolnega predela NINJ1 v poškodbi celične membrane, kar skupaj z nedavnimi strukturnimi študijami lahko pripomore k razvoju inovativnih strategij za zaviranje poškodbe celične membrane, ki jo posreduje NINJ1 in s tem vnetja, ki ga ta proces povzroči.

Jezik:Slovenski jezik
Ključne besede:Ninjurin-1, NINJ1, poškodba celične membrane, PMR, celična smrt, oligomerizacija
Vrsta gradiva:Magistrsko delo/naloga
Tipologija:2.09 - Magistrsko delo
Organizacija:BF - Biotehniška fakulteta
Leto izida:2024
PID:20.500.12556/RUL-155402 Povezava se odpre v novem oknu
COBISS.SI-ID:193896451 Povezava se odpre v novem oknu
Datum objave v RUL:30.03.2024
Število ogledov:657
Število prenosov:151
Metapodatki:XML DC-XML DC-RDF
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Sekundarni jezik

Jezik:Angleški jezik
Naslov:The role of Ninjurin-1 segments in plasma membrane rupture
Izvleček:
Ninjurin-1 (NINJ1) is a transmembrane protein that mediates plasma membrane rupture (PMR) in some forms of lytic cell death, including pyroptosis. Ninjurin-2 (NINJ2), the second member of the ninjurin family in mammals, is not involved in cell membrane rupture. Within this MSc thesis, we wanted to investigate the mechanism by which NINJ1 mediates plasma membrane rupture. We designed and constructed point mutants and truncated versions of NINJ1. Based on the alignment of the amino acid sequences of NINJ1 and NINJ2, we also designed chimeras of NINJ1 and NINJ2, where we exchanged individual segments between them. We introduced the constructs into HEK 293T cells by lipofection, where we measured cell death via propidium iodide dye uptake and lactate dehydrogenase activity. Protein expression was evaluated by western blotting and expression on the cell surface by flow cytometry, for which we tagged the constructs with FLAG and HA tags. Using blue native gel electrophoresis, we showed that NINJ1 oligomerizes and observed higher-order oligomers, which were present to a lesser extent in NINJ2 samples. We have shown that the proteins that were able to mediate PMR are also capable of oligomerization. We have shown that the predicted region of the amphipathic helix and the cytosolic domain play an important role in mediating PMR, while transmembrane helices 1 and 2 and the extracellular C-terminus are interchangeable between NINJ1 and NINJ2. We were unable to determine the influence of the N-terminus (the adhesion motif of NINJ1) due to conflicting results. Our results suggest an important role of the amphipathic helix and the cytosolic domain of NINJ1 in cell membrane rupture which, together with recent structural studies, may contribute to the development of innovative strategies to inhibit NINJ1-mediated PMR and inflammation that is perpetuated through this process.

Ključne besede:Ninjurin-1, NINJ1, plasma membrane rupture, PMR, cell death, oligomerisation

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