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BASE: Brain Age Standardized Evaluation
ID Dular, Lara (Author), ID Špiclin, Žiga (Author)

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Abstract
Brain age, most commonly inferred from T1-weighted magnetic resonance images (T1w MRI), is a robust biomarker of brain health and related diseases. Superior accuracy in brain age prediction, often falling within a 2–3 year range, is achieved predominantly through deep neural networks. However, comparing study results is difficult due to differences in datasets, evaluation methodologies and metrics. Addressing this, we introduce Brain Age Standardized Evaluation (BASE), which includes (i) a standardized T1w MRI dataset including multi-site, new unseen site, test-retest and longitudinal data, and an associated (ii) evaluation protocol, including repeated model training and upon based comprehensive set of performance metrics measuring accuracy, robustness, reproducibility and consistency aspects of brain age predictions, and (iii) statistical evaluation framework based on linear mixed-effects models for rigorous performance assessment and cross-comparison. To showcase BASE, we comprehensively evaluate four deep learning based brain age models, appraising their performance in scenarios that utilize multi-site, test-retest, unseen site, and longitudinal T1w brain MRI datasets. Ensuring full reproducibility and application in future studies, we have made all associated data information and code publicly accessible at https://github.com/AralRalud/BASE.git.

Language:English
Keywords:brain age, evaluation, deep regression, accuracy, robustness, reproducibility, consistency, UK biobank
Work type:Article
Typology:1.01 - Original Scientific Article
Organization:FE - Faculty of Electrical Engineering
Publication status:Published
Publication version:Version of Record
Year:2024
Number of pages:15 str.
Numbering:Vol. 285, art. 120469
PID:20.500.12556/RUL-153065 This link opens in a new window
UDC:616.8:004
ISSN on article:1095-9572
DOI:10.1016/j.neuroimage.2023.120469 This link opens in a new window
COBISS.SI-ID:176687875 This link opens in a new window
Publication date in RUL:15.12.2023
Views:512
Downloads:42
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Record is a part of a journal

Title:NeuroImage
Shortened title:NeuroImage
Publisher:Elsevier
ISSN:1095-9572
COBISS.SI-ID:520131353 This link opens in a new window

Licences

License:CC BY 4.0, Creative Commons Attribution 4.0 International
Link:http://creativecommons.org/licenses/by/4.0/
Description:This is the standard Creative Commons license that gives others maximum freedom to do what they want with the work as long as they credit the author.

Secondary language

Language:Slovenian
Keywords:možganska starost, vrednotenje, globoka regresija, točnost, robustnost, ponovljivost, konsistentnost, UK biobank

Projects

Funder:ARRS - Slovenian Research Agency
Project number:P2-0232
Name:Analiza biomedicinskih slik in signalov

Funder:ARRS - Slovenian Research Agency
Project number:J2-2500
Name:Analiza medicinskih slik s strojnim učenjem za napovedovanje poteka možganskih bolezni in učinkovitosti terapije

Funder:ARRS - Slovenian Research Agency
Project number:J2-3059
Name:Sprotno prilagajanje načrta protonske in radioterapije

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