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Utišanje genov kmetijskih rastlin s pomočjo virusnih ekspresijskih vektorjev
ID Marković, Lucija (Author), ID Murovec, Jana (Mentor) More about this mentor... This link opens in a new window

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Abstract
Od 90ih let prejšnjega stoletja je bila metoda utišanja genov z virusnimi ekspresijskimi vektorji (VIGS) uspešno razvita že za mnoge rastlinske vrste, tudi za več kmetijsko pomembnih vrst. Metoda je pogosto uporabljena v študijah, kjer preučujejo interakcije med geni v rastlinah, saj je dokaj enostavna, hitra ter cenovno ugodna. Pri tej metodi z rekombinantnim virusnim vektorjem vnesemo v rastlino gen, ki ga želimo utišati. To sproži mehanizem post-transkripcijskega utišanja genov (PTGS), ki s posredovanjem RNAi, dicer-ja in kompleksa RISC razgradi gostiteljsko mRNA. S tem prepreči tvorbo proteina, kar se na rastlini pokaže kot pojav utišanega fenotipa. Poznanih je več kot 30 različnih virusnih vektorjev, nekateri izmed najpogosteje uporabljenih pa so virus tobačnega mozaika (TMV), krompirjev virus X (PVX), latentni kroglasti virus jablane (ALSV), virus črtastega mozaika ječmena (BSMV) in virus šelestenja tobaka (TRV). Najlažji način vnosa virusnega vektorja v gostiteljsko rastlino je s pomočjo vektorskega prenašalca bakterije A. tumefaciens, ki je sposobna prenesti svojo T-DNA iz Ti-plazmida v rastlinski genom. VIGS je perspektiven tudi v prihodnosti, saj bo z odkrivanjem novih virusnih vektorjev in optimizacijo načinov infiltracije gostiteljskih rastlin mogoče utišati gene tudi pri rastlinah, pri katerih to sedaj še ni mogoče. To nam bo omogočilo še boljše razumevanje funkcije genov v rastlinah in interakcij med njimi.

Language:Slovenian
Keywords:VIGS, utišanje genov, RNAi, Agrobacterium tumefaciens, virusni vektorji, tobačni mozaični virus, krompirjev virus X, latentni kroglasti virus jablane, virus črtastega mozaika ječmena, virus šelestenja tobaka
Work type:Bachelor thesis/paper
Typology:2.11 - Undergraduate Thesis
Organization:BF - Biotechnical Faculty
Place of publishing:Ljubljana
Publisher:[L. Marković]
Year:2021
PID:20.500.12556/RUL-131103 This link opens in a new window
UDC:601.4:577.21:602.6:582.5/.9:606:613.528(043.2)
COBISS.SI-ID:77566723 This link opens in a new window
Publication date in RUL:23.09.2021
Views:1048
Downloads:116
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Secondary language

Language:English
Title:Virus-induced gene silencing in plants
Abstract:
Since the 1990s, the virus-induced gene silencing (VIGS) method has been successfully developed for many plants, including several agriculturally important species. The method is often used in studies examining interactions between genes in plants, because it is simple, fast, and affordable. In this method, a gene that we want to silence is introduced into the plant by a recombinant viral vector. This triggers the post-transcriptioal gene silencing (PTGS) mechanism, which degrades the host mRNA through RNAi, dicer and the RISC complex. This prevents the formation of protein, which is manifested on the plant as the appearance of a silenced phenotype. More than 30 different viral vectors are known, and some of the most commonly used are tobacco mosaic virus (TMV), potato virus X (PVX), apple latent spherical virus (ALSV), barley stripe mosaic virus (BSMV) and tobacco rattle virus (TRV). The easiest way to introduce a viral vector into a host plant is by using the vector transporter bacterium A. tumefaciens, which is able to transfer its T-DNA from the Ti-plasmid into the plant genome. VIGS is also promising in the future, as the discovery of new viral vectors and the optimization of infiltration methods of host plants will make it possible to silence genes in plants for which this is not yet possible. This will allow us to better understand the function of genes in plants and the interactions between them.

Keywords:VIGS, gene silencing, RNAi, Agrobacterium tumefaciens, viral vectors, tobacco mosaic virus, potato virus X, apple latent spherical virus, barley stripe mosaic virus, tobacco rattle virus

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