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Vpliv mutacij na zgradbo in aktivnost fosfolipaze PC-PLC iz bakterije Listeria monocytogenes
ID Kujović, Amela (Author), ID Podobnik, Marjetka (Mentor) More about this mentor... This link opens in a new window

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Abstract
Listeria monocytogenes je znotrajcelicni patogen, ki lahko povzroca hude okuzbe pri ljudeh in drugih vretencarjih. Prisotna je v prsti, vodi, vegetaciji in hrani, za izbruhe bolezni pri ljudeh pa naj bi bila predvsem kriva okuzena hrana. Eden od kljucnih virulentnih dejavnikov bakterije je sirokospecificna fosfolipaza C (PC-PLC), ki ob sodelovanju z drugimi virulentni dejavniki, predvsem listeriolizinom O, bakteriji omogoca pobeg iz kislega okolja fagosoma v citosol, kjer se razmnozuje in nato siri v sosednje celice. PC-PLC ima v aktivnem mestu tri cinkove atome, ki so nujni za njeno delovanje. Njen optimum delovanja je v kislem pH (5-6), najvisjo afiniteto pa ima do fosfatidilholinskih fosfolipidov. V magistrski nalogi smo preucili vpliv mutacij v genskem zaporedju za PC-PLC na njeno encimsko aktivnost in vezavo na modelne lipidne membrane v odvisnosti od prisotnosti cinkovih ionov. V bakterijskem ekspresijskem sistemu smo uspesno pridobili sedem mutantih proteinov fosfolipaze PC-PLC, od tega pet s substitucijami ali delecijami v triptofanskem ostanku, ki se nahaja v aktivnem mestu (W1A, W1E, W1F, W1K, ?WS) in dva cisteinska mutantna proteina (C143S, C168K in C143S, C168S). Ocistili smo jih s hitin-afinitetno in gelsko kromatografijo ter jih biokemijsko (SDS-PAGE, test encimske aktivnosti, test vezave na modelne lipidne vezikle) in biofizikalno (cirkularni dihroizem) okarakterizirali. Ugotovili smo, da izbrane mutacije v splosnem ne vplivajo na stabilnost PC-PLC, vplivajo pa na encimsko aktivnost in vezavo proteina na lipidne membrane. Ugotovili smo tudi, da dodatek cinkovih ionov opazno poveca encimsko aktivnost in vezavo PC-PLC na lipidne membrane. Poleg tega smo z optimizacijo kristalizacije PC-PLC vzpostavili temelj za dolocanje tridimenzionalne strukture te fosfolipaze.

Language:Slovenian
Keywords:bakterija, Listeria monocytogenes, fosfolipaza C, mutantni proteini
Work type:Master's thesis/paper
Organization:BF - Biotechnical Faculty
Year:2019
PID:20.500.12556/RUL-109354 This link opens in a new window
COBISS.SI-ID:5191759 This link opens in a new window
Publication date in RUL:31.08.2019
Views:1628
Downloads:292
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Secondary language

Language:English
Title:Effects of mutations on structure and activity of a phospholipase PC-PLC from bacterium Listeria monocytogenes
Abstract:
Listeria monocytogenes is an intracellular pathogen, which can cause severe infections in humans and other vertebrates. It is found in soil, water, vegetation and food; most of infections in humans are caused by ingestion of contaminated food. One of the main virulence factors of the bacteria is phospholipase C (PC-PLC), which together with listeriolysin O enables the escape of bacteria from acidic phagosome into host cell cytosol, where it replicates and spreads into neighbouring cells. PC-PLC activity depends on three zinc atoms in the active site. The activity optimum is in acidic pH (5-6) and the highest affinity is towards phosphatidylcholine phospholipids. The aim of this master thesis was to study, how mutations in PC-PLC gene sequence effect PC-PLC enzymatic activity and binding on model lipid membranes in presence of zinc ions. In bacterial expression system seven mutated phospholipases PC-PLC genes were successfully expressed and mutant proteins synthesized. Mutant phospholipases had substitutions or deletions in tryptophan residue at the active site of protein (W1A, W1E, W1F, W1K, ?WS) and two cysteine mutant proteins (C143S, C168K and C143S, C168S). Proteins were purified by chitin affinity and gel chromatography. Isolated proteins were characterized using biochemical (SDS-PAGE, enzymatic activity assays, binding assay) and biophysical (circular dichroism) methods. Our results showed that mutations had in general no effect on the stability of PC-PLC, but they effected enzymatic activity and binding of protein on lipid membranes. It was shown that addition of zinc ions increased enzymatic activity and binding of PC-PLC on lipid membranes. With optimization of PC-PLC crystallography we established the basis for future determination of phospholipase's three-dimensional structure.

Keywords:bacterium, Listeria monocytogenes, phospholipase C, mutant proteins

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