1. Interaction between oligomers of stefin B and amyloid-beta in vitro and in cellsKatja Škerget, Ajda Taler-Verčič, Andrej Bavdek, Vesna Hodnik, Slavko Čeru, Magda Tušek-Žnidarič, Maruša Pompe Novak, Nataša Kopitar-Jerala, Vito Turk, Gregor Anderluh, Eva Žerovnik, 2010, original scientific article Keywords: neurodegeneration, Alzheimer's disease, mass spectrometry, surface plasmon resonance, protein folding, protein-protein interactions, amyloid Full text (outside link) |
2. Conditional cooperativity in DNA minor-groove recognition by oligopeptidesJurij Lah, San Hadži, 2021, original scientific article Keywords: DNA recognition, conditional cooperativity, transcription regulation, protein–DNA interactions, ligand–DNA interactions, distamycin, netropsin, thermodynamics of binding, phase diagrams, DNA folding Full text (file, 1,68 MB) This document has more files! More... |
3. Molecular velocity auto-correlations in glycerol/water mixtures studied by NMR MGSE methodJanez Stepišnik, Carlos Mattea, Siegfried Stapf, Aleš Mohorič, 2020, original scientific article Keywords: molecular dynamics, nuclear magnetic resonance, MGSE method, glycerol/water mixture, NMR, gradient spin-echo, self-diffusion, molecular velocity auto-correlation, shear rate viscosity thickening, protein folding Full text (file, 1,53 MB) This document has more files! More... |
4. The free energy folding penalty accompanying binding of intrinsically disordered α-helical motifsSan Hadži, Jurij Lah, 2022, original scientific article Keywords: binding motif, folding penalty, folding-upon-binding, fuzziness, intrinsically disordered proteins, peptide inhibitor, pre-folding Full text (file, 1,78 MB) This document has more files! More... |
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6. Leucine motifs stabilize residual helical structure in disordered proteinsUroš Zavrtanik, Tadej Medved, Samo Purič, Wim F. Vranken, Jurij Lah, San Hadži, 2024, original scientific article Keywords: intrinsically disordered proteins, folding-upon-binding, pre-folding, preotein recognition motif, leucine recognition motif Full text (file, 1,65 MB) This document has more files! More... |
7. Estimation of peptide helicity from circular dichroism using the ensemble modelUroš Zavrtanik, Jurij Lah, San Hadži, 2024, original scientific article Keywords: circular dichroism, helix-coil transition, Lifson-Roig model, helix ellipticity, polylanine alpha-helix folding thermodynamics Full text (file, 4,04 MB) This document has more files! More... |